RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1136505", tax_phylum = "Candidatus Woesearchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Woesearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1136505 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27797076 27797076 PRJNA1136505_P_NODE_108544_length_277_cov_1.436275_g101684_i0 PRJNA1136505 108544 277 1.436275 3.97848175 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 60.1 4.55e-8   NR MBS3142235.1 2026803 g101684 i0 40.5 1.64620938628159 79 43 85.6 3 1 237 820 894 MBS3142235.1 methionine--tRNA ligase [Candidatus Woesearchaeota archaeon] diamond 456 60.1 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
28775628 28775628 PRJNA1136505_P_NODE_59127_length_393_cov_1.275000_g52267_i0 PRJNA1136505 59127 393 1.275 5.01075 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 87.8 5.97e-18   NR MBS3113391.1 2026803 g52267 i0 40.2 1.80916030534351 122 62 92.4 2 364 2 2 113 MBS3113391.1 vitamin K epoxide reductase family protein [Candidatus Woesearchaeota archaeon] diamond 711 87.8 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;