contig_metadata
16 rows where bioproject = "PRJNA1136505", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284445 | 284445 | PRJNA1136505_P_NODE_114061_length_270_cov_1.406091_g107201_i0 | PRJNA1136505 | 114061 | 270 | 1.406091 | 3.7964457 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 112 | 1.7600000000000002e-26 | NR | HEY8280078.1 | 3034175 | g107201 | i0 | 81.2 | 0.766666666666667 | 69 | 13 | 76.7 | 0 | 208 | 2 | 1 | 69 | HEY8280078.1 response regulator [Bdellovibrionota bacterium] | diamond | 207 | 112 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 11763086 | 11763086 | PRJNA1136505_P_NODE_120650_length_262_cov_1.444444_g113790_i0 | PRJNA1136505 | 120650 | 262 | 1.444444 | 3.78444328 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 440 | 4.369999999999998e-119 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g113790 | i0 | 96.947 | 37.4007633587786 | 262 | 8 | 100 | 0 | 1 | 262 | 700473 | 700212 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 9799 | 440 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 13038187 | 13038187 | PRJNA1136505_P_NODE_133611_length_250_cov_0.870056_g126751_i0 | PRJNA1136505 | 133611 | 250 | 0.870056 | 2.17514 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 154 | 2.45e-43 | NR | HEY8278660.1 | 3034175 | g126751 | i0 | 91.6 | 0.996 | 83 | 7 | 99.6 | 0 | 1 | 249 | 58 | 140 | HEY8278660.1 cell division protein FtsA [Bdellovibrionota bacterium] | diamond | 249 | 154 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 16861574 | 16861574 | PRJNA1136505_P_NODE_113414_length_271_cov_1.186869_g106554_i0 | PRJNA1136505 | 113414 | 271 | 1.186869 | 3.21641499 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 178 | 9.61e-53 | NR | HEY8280086.1 | 3034175 | g106554 | i0 | 91.1 | 1.99261992619926 | 90 | 8 | 99.6 | 0 | 1 | 270 | 75 | 164 | HEY8280086.1 tyrosine--tRNA ligase [Bdellovibrionota bacterium] | diamond | 540 | 178 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 19410452 | 19410452 | PRJNA1136505_P_NODE_88456_length_308_cov_2.225532_g81596_i0 | PRJNA1136505 | 88456 | 308 | 2.225532 | 6.85463856 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 558 | 1.39e-154 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g81596 | i0 | 99.351 | 106.597402597403 | 308 | 2 | 100 | 0 | 1 | 308 | 700739 | 700432 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 32832 | 558 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 23236805 | 23236805 | PRJNA1136505_P_NODE_147719_length_244_cov_0.900585_g140859_i0 | PRJNA1136505 | 147719 | 244 | 0.900585 | 2.1974274 | Bdellovibrio bacteriovorus W | 765869 | Bacteria | Bacteria | 134 | 2.8799999999999997e-35 | NR | AHI04961.1 | 765869 | g140859 | i0 | 80 | 1.9672131147541 | 80 | 16 | 98.4 | 0 | 240 | 1 | 145 | 224 | AHI04961.1 tetracycline-efflux transporter [Bdellovibrio bacteriovorus W] | diamond | 480 | 134 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 26690494 | 26690494 | PRJNA1136505_P_NODE_144581_length_245_cov_0.895349_g137721_i0 | PRJNA1136505 | 144581 | 245 | 0.895349 | 2.19360505 | Halobacteriovorax sp. | 2020862 | Bacteria | Bacteria | 83.6 | 1.61e-16 | NR | MBK25175.1 | 2020862 | g137721 | i0 | 51.9 | 3.93061224489796 | 81 | 37 | 99.2 | 1 | 1 | 243 | 474 | 552 | MBK25175.1 hypothetical protein [Halobacteriovorax sp.] | diamond | 963 | 83.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovorax | Halobacteriovorax sp. | ||
| 26943704 | 26943704 | PRJNA1136505_P_NODE_137442_length_248_cov_0.880000_g130582_i0 | PRJNA1136505 | 137442 | 248 | 0.88 | 2.1824 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 53.9 | 2.45e-6 | NR | MBF0314245.1 | 2599941 | g130582 | i0 | 36.4 | 1.65725806451613 | 77 | 48 | 91.9 | 1 | 2 | 229 | 125 | 201 | MBF0314245.1 YceI family protein [Oligoflexia bacterium] | diamond | 411 | 53.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 28806989 | 28806989 | PRJNA1136505_P_NODE_146588_length_244_cov_1.391813_g139728_i0 | PRJNA1136505 | 146588 | 244 | 1.391813 | 3.39602372 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 107 | 4.8e-25 | NR | HEY8279876.1 | 3034175 | g139728 | i0 | 60.8 | 0.971311475409836 | 79 | 31 | 97.1 | 0 | 6 | 242 | 1828 | 1906 | HEY8279876.1 PD-(D/E)XK nuclease family protein [Bdellovibrionota bacterium] | diamond | 237 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28922480 | 28922480 | PRJNA1136505_P_NODE_58788_length_394_cov_2.439252_g51928_i0 | PRJNA1136505 | 58788 | 394 | 2.439252 | 9.61065288 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 95.5 | 1.67e-20 | NR | WP_102242841.1 | 960 | g51928 | i0 | 44.3 | 7.19543147208122 | 106 | 58 | 80.7 | 1 | 323 | 6 | 4 | 108 | WP_102242841.1 fatty acid desaturase [Bacteriovorax stolpii] | diamond | 2835 | 96.3 | 0.991692627206646 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 30355239 | 30355239 | PRJNA1136505_P_NODE_131892_length_250_cov_1.706215_g125032_i0 | PRJNA1136505 | 131892 | 250 | 1.706215 | 4.2655375 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 47 | 0.00125 | NR | HEY8278818.1 | 3034175 | g125032 | i0 | 54 | 0.6 | 50 | 23 | 60 | 0 | 150 | 1 | 274 | 323 | HEY8278818.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 150 | 47 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31144160 | 31144160 | PRJNA1136505_P_NODE_122095_length_260_cov_1.647059_g115235_i0 | PRJNA1136505 | 122095 | 260 | 1.647059 | 4.2823534 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 126 | 2.89e-34 | NR | HEY8279498.1 | 3034175 | g115235 | i0 | 70.6 | 0.980769230769231 | 85 | 25 | 98.1 | 0 | 5 | 259 | 17 | 101 | HEY8279498.1 M15 family metallopeptidase [Bdellovibrionota bacterium] | diamond | 255 | 126 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31713871 | 31713871 | PRJNA1136505_P_NODE_153277_length_242_cov_0.911243_g146417_i0 | PRJNA1136505 | 153277 | 242 | 0.911243 | 2.20520806 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 129 | 1.11e-32 | NR | WP_409478962.1 | 3386277 | g146417 | i0 | 91.5 | 0.880165289256198 | 71 | 6 | 88 | 0 | 28 | 240 | 498 | 568 | WP_409478962.1 PrkA family serine protein kinase [Pseudobdellovibrio sp. HCB154] | diamond | 213 | 129 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 31808777 | 31808777 | PRJNA1136505_P_NODE_98977_length_290_cov_0.995392_g92117_i0 | PRJNA1136505 | 98977 | 290 | 0.995392 | 2.8866368 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 186 | 3.3799999999999996e-56 | NR | HEY8278275.1 | 3034175 | g92117 | i0 | 86.5 | 0.993103448275862 | 96 | 13 | 99.3 | 0 | 290 | 3 | 82 | 177 | HEY8278275.1 nucleotidyltransferase [Bdellovibrionota bacterium] | diamond | 288 | 186 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 32082490 | 32082490 | PRJNA1136505_P_NODE_100538_length_287_cov_2.378505_g93678_i0 | PRJNA1136505 | 100538 | 287 | 2.378505 | 6.82630935 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 106 | 6.07e-25 | NR | WP_325144466.1 | 1971216 | g93678 | i0 | 50.5 | 8.59233449477352 | 95 | 47 | 99.3 | 0 | 287 | 3 | 231 | 325 | WP_325144466.1 alkane 1-monooxygenase [Oligoflexus sp.] | diamond | 2466 | 107 | 0.990654205607477 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 32441859 | 32441859 | PRJNA1136505_P_NODE_122999_length_259_cov_1.569892_g116139_i0 | PRJNA1136505 | 122999 | 259 | 1.569892 | 4.06602028 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 87.8 | 4.26e-18 | NR | MFT6068097.1 | 2081706 | g116139 | i0 | 66.7 | 0.694980694980695 | 60 | 20 | 69.5 | 0 | 243 | 64 | 344 | 403 | MFT6068097.1 cobalt-zinc-cadmium efflux system outer membrane protein [Bacteriovoracaceae bacterium] | diamond | 180 | 87.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;