RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1136505", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1136505 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9212522 9212522 PRJNA1136505_P_NODE_44348_length_487_cov_2.413043_g37489_i0 PRJNA1136505 44348 487 2.413043 11.75151941 Rozella allomycis CSF55 988480 Fungi Fungi 236 2.7899999999999996e-73   NR RKP20942.1 988480 g37489 i0 66.7 1.98357289527721 162 53 99.8 1 2 487 113 273 RKP20942.1 NEDD8 activating enzyme [Rozella allomycis CSF55] diamond 966 236 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30260194 30260194 PRJNA1136505_P_NODE_114652_length_269_cov_1.760204_g107792_i0 PRJNA1136505 114652 269 1.760204 4.73494876 Rozella allomycis CSF55 988480 Fungi Fungi 54.7 3.09e-6   NR EPZ32583.1 988480 g107792 i0 41.8 3.8364312267658 67 39 74.7 0 13 213 423 489 EPZ32583.1 Choline transporter-like domain-containing protein [Rozella allomycis CSF55] diamond 1032 54.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31682018 31682018 PRJNA1136505_P_NODE_112877_length_271_cov_2.535354_g106017_i0 PRJNA1136505 112877 271 2.535354 6.87080934 Rozella allomycis CSF55 988480 Fungi Fungi 85.5 4.82e-17   NR EPZ31936.1 988480 g106017 i0 44.3 1.94833948339483 88 49 97.4 0 270 7 17 104 EPZ31936.1 Cytochrome P450 domain-containing protein [Rozella allomycis CSF55] diamond 528 85.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;