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contig_metadata

22 rows where bioproject = "PRJNA1136505", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 22 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 22 ✖

bioproject 1

  • PRJNA1136505 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
284537 284537 PRJNA1136505_P_NODE_97941_length_291_cov_1.440367_g91081_i0 PRJNA1136505 97941 291 1.440367 4.19146797 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.7 5.39e-21   NR KAI1731641.1 166010 g91081 i0 83.6 25.4742268041237 55 9 56.7 0 6 170 411 465 KAI1731641.1 elongation factor tu GTP binding domain-containing protein [Ditylenchus destructor] diamond 7413 97.1 0.995880535530381 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
1559092 1559092 PRJNA1136505_P_NODE_28462_length_745_cov_4.065476_g21793_i0 PRJNA1136505 28462 745 4.065476 30.2877962 Pristionchus microcercus 3308705 Nematoda Nematoda 442 3.789999999999999e-119   NTclustered gi|675118833|gb|KJ877296.1| 3308705 g21793 i0 78.016 97.4093959731544 746 134 98 27 10 740 731 1 Paroigolaimella micrura large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds blastn 72570 442 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus microcercus
1559116 1559116 PRJNA1136505_P_NODE_67602_length_361_cov_0.868056_g60742_i0 PRJNA1136505 67602 361 0.868056 3.13368216 Strongyloides ratti 34506 Nematoda Nematoda 182 1.4e-51   NR XP_024510700.1 34506 g60742 i0 75 7.92797783933518 120 29 99.7 1 2 361 31 149 XP_024510700.1 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain and ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal domain and ATPase, F1 complex alpha/beta subunit, N-terminal domain and ATPase, V1 complex, subunit A family and V-type ATP synthase catalytic alpha chain family and ATPase, F1 complex beta subunit/V1 complex, C-terminal domain and P-loop containing nucleoside triphosphate hydrolase domain-containing protein [Strongyloides ratti] diamond 2862 182 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
5387660 5387660 PRJNA1136505_P_NODE_114825_length_269_cov_1.505102_g107965_i0 PRJNA1136505 114825 269 1.505102 4.04872438 Trichuris suis 68888 Nematoda Nematoda 98.6 1.2e-21   NR KFD54850.1 68888 g107965 i0 54.7 4.817843866171 86 36 95.9 1 264 7 675 757 KFD54850.1 hypothetical protein M513_04284 [Trichuris suis] diamond 1296 98.6 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
9212525 9212525 PRJNA1136505_P_NODE_55488_length_411_cov_0.982249_g48628_i0 PRJNA1136505 55488 411 0.982249 4.03704339 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 214 2.94e-61   NR KAL1227885.1 6334 g48628 i0 72.8 38.6131386861314 136 37 99.3 0 410 3 85 220 KAL1227885.1 Pre-mRNA-processing-splicing factor [Trichinella spiralis] diamond 15870 216 0.990740740740741 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
9212541 9212541 PRJNA1136505_P_NODE_98268_length_291_cov_0.894495_g91408_i0 PRJNA1136505 98268 291 0.894495 2.60298045 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 126 1.87e-31   NR KRX92115.1 6337 g91408 i0 62.9 14.979381443299 97 36 100 0 291 1 258 354 KRX92115.1 DNA-directed RNA polymerase II subunit RPB2 [Trichinella pseudospiralis] diamond 4359 126 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
18136180 18136180 PRJNA1136505_P_NODE_123335_length_259_cov_1.188172_g116475_i0 PRJNA1136505 123335 259 1.188172 3.07736548 Strongyloides ratti 34506 Nematoda Nematoda 174 4.83e-39   NTclustered gi|1376148385|ref|XM_024654896.1| 34506 g116475 i0 79.167 66.4633204633205 264 45 100 8 1 259 742 1000 Strongyloides ratti Phosphate carrier protein, mitochondrial (SRAE_2000367400), partial mRNA blastn 17214 174 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
21961231 21961231 PRJNA1136505_P_NODE_124818_length_257_cov_1.266304_g117958_i0 PRJNA1136505 124818 257 1.266304 3.25440128 Mesorhabditis spiculigera 96644 Nematoda Nematoda 132 1.4499999999999999e-34   NR CAJ0583805.1 96644 g117958 i0 80.2 0.945525291828794 81 16 94.6 0 256 14 335 415 CAJ0583805.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 243 132 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
24510453 24510453 PRJNA1136505_P_NODE_153820_length_241_cov_1.833333_g146960_i0 PRJNA1136505 153820 241 1.833333 4.41833253 Strongyloides papillosus 174720 Nematoda Nematoda 255 1.54e-63   NTclustered gi|687022646|emb|LM525560.1| 174720 g146960 i0 86.638 91.6265560165975 232 30 96 1 1 232 864975 865205 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000001 blastn 22082 255 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
27133217 27133217 PRJNA1136505_P_NODE_66002_length_366_cov_1.767918_g59142_i0 PRJNA1136505 66002 366 1.767918 6.47057988 Aphelenchoides besseyi 269767 Nematoda Nematoda 72.4 6.18e-12   NR KAI6188765.1 269767 g59142 i0 35.5 4.71311475409836 121 74 98.4 3 3 362 737 854 KAI6188765.1 AP complex subunit beta [Aphelenchoides besseyi] diamond 1725 72.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
27228310 27228310 PRJNA1136505_P_NODE_39703_length_536_cov_1.496760_g32862_i0 PRJNA1136505 39703 536 1.49676 8.0226336 Loa loa 7209 Nematoda Nematoda 139 7.28e-38   NR XP_020306458.1 7209 g32862 i0 43.6 8.98880597014925 179 86 99.6 5 1 534 19 183 XP_020306458.1 hypothetical protein LOAG_17285 [Loa loa] diamond 4818 139 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
28997021 28997021 PRJNA1136505_P_NODE_102668_length_285_cov_0.981132_g95808_i0 PRJNA1136505 102668 285 0.981132 2.7962262 Mesorhabditis belari 2138241 Nematoda Nematoda 178 4.42e-52   NR CAJ0951810.1 2138241 g95808 i0 82.1 2 95 17 100 0 1 285 129 223 CAJ0951810.1 unnamed protein product, partial [Mesorhabditis belari] diamond 570 178 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
29312472 29312472 PRJNA1136505_P_NODE_114609_length_269_cov_1.948980_g107749_i0 PRJNA1136505 114609 269 1.94898 5.2427562 Strongyloides ratti 34506 Nematoda Nematoda 70.5 9.15e-12   NR XP_024508956.1 34506 g107749 i0 51.5 10.003717472119 66 31 72.5 1 197 3 59 124 XP_024508956.1 Unconventional myosin-X [Strongyloides ratti] diamond 2691 70.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
30564612 30564612 PRJNA1136505_P_NODE_70293_length_352_cov_1.379928_g63433_i0 PRJNA1136505 70293 352 1.379928 4.85734656 Metazoa 33208 Nematoda Nematoda 111 1.2e-25   NR KAL1233244.1 6337 g63433 i0 51.4 12.5795454545455 111 52 92.9 1 24 350 224 334 KAL1233244.1 Splicing factor 3B subunit [Trichinella pseudospiralis] diamond 4428 112 0.991071428571429 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
30638953 30638953 PRJNA1136505_P_NODE_29633_length_713_cov_4.931250_g22912_i0 PRJNA1136505 29633 713 4.93125 35.1598125 Ditylenchus destructor 166010 Nematoda Nematoda 191 4.58e-57   NR KAI1731507.1 166010 g22912 i0 50.2 6.26086956521739 209 95 87.1 2 675 55 4 205 KAI1731507.1 ribosomal protein l13e domain-containing protein [Ditylenchus destructor] diamond 4464 191 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
31007302 31007302 PRJNA1136505_P_NODE_101574_length_286_cov_1.446009_g94714_i0 PRJNA1136505 101574 286 1.446009 4.13558574 Metazoa 33208 Nematoda Nematoda 112 1.18e-28   NR TMS34839.1 34508 g94714 i0 68.4 5.97902097902098 95 30 99.7 0 1 285 70 164 TMS34839.1 hypothetical protein L596_002350 [Steinernema carpocapsae] diamond 1710 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
31144161 31144161 PRJNA1136505_P_NODE_125855_length_255_cov_4.192308_g118995_i0 PRJNA1136505 125855 255 4.192308 10.6903854 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 45.8 0.0033   NR CAD5208695.1 6326 g118995 i0 44.8 0.682352941176471 58 32 68.2 0 175 2 28 85 CAD5208695.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 174 45.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31386761 31386761 PRJNA1136505_P_NODE_142116_length_246_cov_0.890173_g135256_i0 PRJNA1136505 142116 246 0.890173 2.18982558 Metazoa 33208 Nematoda Nematoda 72 1.81e-12   NR KAF7637741.1 189291 g135256 i0 50 8.4390243902439 70 34 85.4 1 11 220 119 187 KAF7637741.1 L-type lectin-like domain-containing protein [Meloidogyne graminicola] diamond 2076 72 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
31745389 31745389 PRJNA1136505_P_NODE_146257_length_244_cov_1.801170_g139397_i0 PRJNA1136505 146257 244 1.80117 4.3948548 Mesorhabditis belari 2138241 Nematoda Nematoda 81.3 8.57e-16   NR CAJ0951810.1 2138241 g139397 i0 53.2 0.94672131147541 77 35 93.4 1 228 1 10 86 CAJ0951810.1 unnamed protein product, partial [Mesorhabditis belari] diamond 231 81.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
32588887 32588887 PRJNA1136505_P_NODE_154599_length_241_cov_0.916667_g147739_i0 PRJNA1136505 154599 241 0.916667 2.20916747 Metazoa 33208 Nematoda Nematoda 43.5 0.0162   NR KJH45415.1 29172 g147739 i0 36.8 13.7053941908714 76 47 93.4 1 16 240 77 152 KJH45415.1 hypothetical protein DICVIV_08539 [Dictyocaulus viviparus] diamond 3303 43.9 0.990888382687927 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
32714585 32714585 PRJNA1136505_P_NODE_75780_length_337_cov_1.450758_g68920_i0 PRJNA1136505 75780 337 1.450758 4.88905446 Rhabditida 6236 Nematoda Nematoda 127 1.08e-34   NR VDK74616.1 6269 g68920 i0 56.3 3.5786350148368 112 49 99.7 0 336 1 7 118 VDK74616.1 unnamed protein product [Anisakis simplex] diamond 1206 127 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
32820010 32820010 PRJNA1136505_P_NODE_158300_length_228_cov_2.180645_g151440_i0 PRJNA1136505 158300 228 2.180645 4.9718706 Cooperia oncophora 27828 Nematoda Nematoda 97.8 6.409999999999999e-23   NR KAK6037515.1 27828 g151440 i0 62.7 9.88157894736842 75 28 98.7 0 3 227 169 243 KAK6037515.1 ATP synthase, subunit C [Cooperia oncophora] diamond 2253 97.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Cooperia Cooperia oncophora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;