RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1136505", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA1136505 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27639210 27639210 PRJNA1136505_P_NODE_12704_length_1936_cov_7.066559_g8812_i0 PRJNA1136505 12704 1936 7.066559 136.80858224 Minisyncoccota bacterium 2053589 Bacteria Bacteria 162 5.82e-38   NR MEZ0209192.1 2053589 g8812 i0 28.4 0.791838842975207 511 320 76.2 20 1478 3 102 585 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1533 162 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29375578 29375578 PRJNA1136505_P_NODE_144829_length_245_cov_0.895349_g137969_i0 PRJNA1136505 144829 245 0.895349 2.19360505 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62 7.23e-10   NR MFA6609070.1 2053589 g137969 i0 45 0.979591836734694 80 40 98 1 243 4 32 107 MFA6609070.1 NADAR family protein [Candidatus Paceibacterota bacterium] diamond 240 62 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31397709 31397709 PRJNA1136505_P_NODE_19436_length_1194_cov_9.157003_g8812_i2 PRJNA1136505 19436 1194 9.157003 109.33461582 Minisyncoccota bacterium 2053589 Bacteria Bacteria 160 3.4e-39   NR MEZ0209192.1 2053589 g8812 i2 30.8 1.00251256281407 399 234 96 18 1148 3 212 585 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1197 160 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31903595 31903595 PRJNA1136505_P_NODE_17637_length_1351_cov_8.816901_g8812_i1 PRJNA1136505 17637 1351 8.816901 119.11633251 Minisyncoccota bacterium 2053589 Bacteria Bacteria 136 1.71e-30   NR MEZ0209192.1 2053589 g8812 i1 30.5 0.837157660991858 377 209 78.4 18 1348 290 294 641 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1131 136 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32125345 32125345 PRJNA1136505_P_NODE_115458_length_268_cov_1.682051_g108598_i0 PRJNA1136505 115458 268 1.682051 4.50789668 Minisyncoccota bacterium 2053589 Bacteria Bacteria 46.6 0.00225   NR MEZ0209192.1 2053589 g108598 i0 34.5 0.940298507462687 84 52 91.8 2 4 249 199 281 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 252 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;