RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1136505", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1136505 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29438358 29438358 PRJNA1136505_P_NODE_114190_length_270_cov_1.253807_g107330_i0 PRJNA1136505 114190 270 1.253807 3.3852789 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 76.3 2.27e-15   NR HJQ84515.1 2838779 g107330 i0 56.9 2.14444444444444 65 27 72.2 1 3 197 72 135 HJQ84515.1 thiol-disulfide oxidoreductase DCC family protein [Candidatus Binatia bacterium] diamond 579 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30796985 30796985 PRJNA1136505_P_NODE_113774_length_270_cov_1.888325_g106914_i0 PRJNA1136505 113774 270 1.888325 5.0984775 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 44.7 0.00337   NR HXZ87522.1 2785449 g106914 i0 38.2 0.844444444444444 76 46 83.3 1 21 245 48 123 HXZ87522.1 cupin domain-containing protein [Candidatus Binataceae bacterium] diamond 228 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;