RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA1136505" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 17 ✖

bioproject 1

  • PRJNA1136505 · 17 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27280786 27280786 PRJNA1136505_P_NODE_108243_length_277_cov_1.990196_g101383_i0 PRJNA1136505 108243 277 1.990196 5.51284292 Bacteria 2 Bacteria Bacteria 143 1.91e-38   NR MCY4566675.1 2026781 g101383 i0 70.7 29.8916967509025 92 27 99.6 0 276 1 83 174 MCY4566675.1 phosphoenolpyruvate carboxykinase (GTP) [Candidatus Poribacteria bacterium] diamond 8280 144 0.993055555555556 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27639210 27639210 PRJNA1136505_P_NODE_12704_length_1936_cov_7.066559_g8812_i0 PRJNA1136505 12704 1936 7.066559 136.80858224 Minisyncoccota bacterium 2053589 Bacteria Bacteria 162 5.82e-38   NR MEZ0209192.1 2053589 g8812 i0 28.4 0.791838842975207 511 320 76.2 20 1478 3 102 585 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1533 162 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27923174 27923174 PRJNA1136505_P_NODE_76285_length_336_cov_1.171103_g69425_i0 PRJNA1136505 76285 336 1.171103 3.93490608 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 55.1 4.44e-6   NR MBI5711032.1 2212470 g69425 i0 29.1 0.919642857142857 103 67 90.2 2 30 332 19 117 MBI5711032.1 hypothetical protein [Candidatus Eiseniibacteriota bacterium] diamond 309 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
27986358 27986358 PRJNA1136505_P_NODE_133185_length_250_cov_0.870056_g126325_i0 PRJNA1136505 133185 250 0.870056 2.17514 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 60.1 1.8e-8   NR MBI3890558.1 2053640 g126325 i0 44.1 0.816 68 37 81.6 1 17 220 172 238 MBI3890558.1 competence/damage-inducible protein A [Candidatus Wallbacteria bacterium] diamond 204 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
28080965 28080965 PRJNA1136505_P_NODE_135405_length_249_cov_0.875000_g128545_i0 PRJNA1136505 135405 249 0.875 2.17875 Candidatus Colwellbacteria bacterium RIFCSPLOWO2_ 2750074 Bacteria Bacteria 48.5 3.74e-4   NR OGY60449.1 1797692 g128545 i0 45.3 0.63855421686747 53 26 63.9 1 67 225 502 551 OGY60449.1 MAG: hypothetical protein A3I33_02545 [Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_45_11] diamond 159 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Colwelliibacteriota         Candidatus Colwellbacteria bacterium RIFCSPLOWO2_02_FULL_45_11
29028589 29028589 PRJNA1136505_P_NODE_149668_length_243_cov_0.905882_g142808_i0 PRJNA1136505 149668 243 0.905882 2.20129326 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 94.7 2.86e-21   NR MBI5413010.1 2030811 g142808 i0 68.6 0.864197530864197 70 20 84 1 204 1 8 77 MBI5413010.1 uridine phosphorylase [Candidatus Peregrinibacteria bacterium] diamond 210 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
29375578 29375578 PRJNA1136505_P_NODE_144829_length_245_cov_0.895349_g137969_i0 PRJNA1136505 144829 245 0.895349 2.19360505 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62 7.23e-10   NR MFA6609070.1 2053589 g137969 i0 45 0.979591836734694 80 40 98 1 243 4 32 107 MFA6609070.1 NADAR family protein [Candidatus Paceibacterota bacterium] diamond 240 62 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29438358 29438358 PRJNA1136505_P_NODE_114190_length_270_cov_1.253807_g107330_i0 PRJNA1136505 114190 270 1.253807 3.3852789 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 76.3 2.27e-15   NR HJQ84515.1 2838779 g107330 i0 56.9 2.14444444444444 65 27 72.2 1 3 197 72 135 HJQ84515.1 thiol-disulfide oxidoreductase DCC family protein [Candidatus Binatia bacterium] diamond 579 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29754345 29754345 PRJNA1136505_P_NODE_128531_length_252_cov_1.988827_g121671_i0 PRJNA1136505 128531 252 1.988827 5.01184404 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 121 2.3699999999999997e-30   NR PYM15798.1 2053607 g121671 i0 65.1 0.988095238095238 83 29 98.8 0 3 251 232 314 PYM15798.1 MAG: delta(24(24(1)))-sterol reductase [Candidatus Rokuibacteriota bacterium] diamond 249 121 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30438804 30438804 PRJNA1136505_P_NODE_78453_length_330_cov_2.521401_g71593_i0 PRJNA1136505 78453 330 2.521401 8.3206233 Pseudomonadati 3379134 Bacteria Bacteria 55.1 5.03e-6   NR PKO14520.1 2013722 g71593 i0 45.2 1.30909090909091 73 39 66.4 1 250 32 1708 1779 PKO14520.1 MAG: hypothetical protein CVU37_14360, partial [candidate division BRC1 bacterium HGW-BRC1-1] diamond 432 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         candidate division BRC1 bacterium HGW-BRC1-1
30796985 30796985 PRJNA1136505_P_NODE_113774_length_270_cov_1.888325_g106914_i0 PRJNA1136505 113774 270 1.888325 5.0984775 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 44.7 0.00337   NR HXZ87522.1 2785449 g106914 i0 38.2 0.844444444444444 76 46 83.3 1 21 245 48 123 HXZ87522.1 cupin domain-containing protein [Candidatus Binataceae bacterium] diamond 228 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
31228307 31228307 PRJNA1136505_P_NODE_76495_length_335_cov_1.954198_g69635_i0 PRJNA1136505 76495 335 1.954198 6.5465633 Bacteria 2 Bacteria Bacteria 65.9 8.17e-10   NR KKP25432.1 1619073 g69635 i0 38.7 4.5044776119403 93 52 83.3 2 333 55 417 504 KKP25432.1 MAG: Protease Do [candidate division TM6 bacterium GW2011_GWE2_31_21] diamond 1509 66.2 0.995468277945619 Bacteria Bacteria candidate phyla             candidate division TM6 bacterium GW2011_GWE2_31_21
31397709 31397709 PRJNA1136505_P_NODE_19436_length_1194_cov_9.157003_g8812_i2 PRJNA1136505 19436 1194 9.157003 109.33461582 Minisyncoccota bacterium 2053589 Bacteria Bacteria 160 3.4e-39   NR MEZ0209192.1 2053589 g8812 i2 30.8 1.00251256281407 399 234 96 18 1148 3 212 585 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1197 160 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31903595 31903595 PRJNA1136505_P_NODE_17637_length_1351_cov_8.816901_g8812_i1 PRJNA1136505 17637 1351 8.816901 119.11633251 Minisyncoccota bacterium 2053589 Bacteria Bacteria 136 1.71e-30   NR MEZ0209192.1 2053589 g8812 i1 30.5 0.837157660991858 377 209 78.4 18 1348 290 294 641 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1131 136 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32125345 32125345 PRJNA1136505_P_NODE_115458_length_268_cov_1.682051_g108598_i0 PRJNA1136505 115458 268 1.682051 4.50789668 Minisyncoccota bacterium 2053589 Bacteria Bacteria 46.6 0.00225   NR MEZ0209192.1 2053589 g108598 i0 34.5 0.940298507462687 84 52 91.8 2 4 249 199 281 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 252 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32714583 32714583 PRJNA1136505_P_NODE_25640_length_840_cov_1.671447_g19144_i0 PRJNA1136505 25640 840 1.671447 14.0401548 Bacteria 2 Bacteria Bacteria 71.6 3.22e-11   NR OGZ60670.1 1802162 g19144 i0 57.6 0.621428571428571 59 19 21.1 1 185 361 106 158 OGZ60670.1 MAG: hypothetical protein A2919_02110 [Candidatus Spechtbacteria bacterium RIFCSPLOWO2_01_FULL_43_12] diamond 522 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Spechtiibacteriota         Candidatus Spechtbacteria bacterium RIFCSPLOWO2_01_FULL_43_12
32746205 32746205 PRJNA1136505_P_NODE_128880_length_252_cov_1.402235_g122020_i0 PRJNA1136505 128880 252 1.402235 3.5336322 Bacteria 2 Bacteria Bacteria 103 2.2399999999999998e-23   NR OGD20635.1 1797273 g122020 i0 67.6 23.0119047619048 71 23 84.5 0 221 9 536 606 OGD20635.1 MAG: hypothetical protein A2W03_02405, partial [Candidatus Aminicenantes bacterium RBG_16_63_16] diamond 5799 103 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_16_63_16

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;