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contig_metadata

14 rows where bioproject = "PRJNA1136505" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 14 ✖

bioproject 1

  • PRJNA1136505 · 14 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7937560 7937560 PRJNA1136505_P_NODE_59627_length_391_cov_0.861635_g52767_i0 PRJNA1136505 59627 391 0.861635 3.36899285 Thecamonas trahens 529818 Root_unresolved Root_unresolved 265 4.41e-66   NTclustered gi|923126424|ref|XM_013901225.1| 461836 g52767 i0 82.935 80.6649616368287 293 50 75 0 33 325 4663 4955 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12051), partial mRNA blastn 31540 265 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16861618 16861618 PRJNA1136505_P_NODE_21954_length_1019_cov_2.295983_g15846_i0 PRJNA1136505 21954 1019 2.295983 23.39606677 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 192 4.37e-53   NR XP_013757691.1 461836 g15846 i0 39.3 0.921491658488714 313 172 90.1 8 1000 83 171 472 XP_013757691.1 uncharacterized protein AMSG_05621 [Thecamonas trahens ATCC 50062] diamond 939 192 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18136249 18136249 PRJNA1136505_P_NODE_76155_length_336_cov_1.501901_g69295_i0 PRJNA1136505 76155 336 1.501901 5.04638736 Thecamonas trahens 529818 Root_unresolved Root_unresolved 246 1.35e-60   NTclustered gi|923132712|ref|XM_013904368.1| 461836 g69295 i0 80.422 38.2083333333333 332 57 98 8 2 329 1071 744 Thecamonas trahens ATCC 50062 actin-like protein 3 (AMSG_03466), partial mRNA blastn 12838 246 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24510427 24510427 PRJNA1136505_P_NODE_134740_length_249_cov_1.278409_g127880_i0 PRJNA1136505 134740 249 1.278409 3.18323841 Thecamonas trahens 529818 Root_unresolved Root_unresolved 89.8 1.72e-13   NTclustered gi|923132072|ref|XM_013904048.1| 461836 g127880 i0 88 0.301204819277108 75 9 30 0 174 248 330 256 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_02595), partial mRNA blastn 75 89.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24510463 24510463 PRJNA1136505_P_NODE_35660_length_591_cov_1.040541_g28843_i0 PRJNA1136505 35660 591 1.040541 6.14959731 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.005   NTclustered gi|923121597|ref|XM_013898816.1| 461836 g28843 i0 97.059 0.106598984771574 34 0 6 1 119 151 974 1007 Thecamonas trahens ATCC 50062 CCR4-Not complex subunit Caf16 (AMSG_09854), mRNA blastn 63 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27260085 27260085 PRJNA1136505_P_NODE_57443_length_401_cov_1.210366_g50583_i0 PRJNA1136505 57443 401 1.210366 4.85356766 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.4 4.15e-4   NR XP_013755929.1 461836 g50583 i0 32.6 1.51122194513716 138 64 96.5 4 1 387 469 586 XP_013755929.1 RNA exonuclease [Thecamonas trahens ATCC 50062] diamond 606 50.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27859911 27859911 PRJNA1136505_P_NODE_42745_length_502_cov_1.808858_g35890_i0 PRJNA1136505 42745 502 1.808858 9.08046716 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 254 3.3100000000000003e-79   NR XP_013762089.1 461836 g35890 i0 70.1 1.99601593625498 167 50 99.8 0 1 501 72 238 XP_013762089.1 inositol-3-phosphate synthase [Thecamonas trahens ATCC 50062] diamond 1002 254 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29964742 29964742 PRJNA1136505_P_NODE_148151_length_244_cov_0.900585_g141291_i0 PRJNA1136505 148151 244 0.900585 2.1974274 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.4 1.51e-5   NR XP_013758768.1 461836 g141291 i0 41.9 2.27459016393443 62 35 75 1 56 238 45 106 XP_013758768.1 major facilitator superfamily transporter MFS_1 [Thecamonas trahens ATCC 50062] diamond 555 52.8 0.992424242424242 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30291941 30291941 PRJNA1136505_P_NODE_26772_length_797_cov_2.443370_g20193_i0 PRJNA1136505 26772 797 2.44337 19.4736589 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 73.6 1.32e-10   NR XP_013762191.1 461836 g20193 i0 35.9 1.24968632371393 103 63 37.6 2 395 694 2145 2247 XP_013762191.1 PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Thecamonas trahens ATCC 50062] diamond 996 73.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30702239 30702239 PRJNA1136505_P_NODE_91494_length_303_cov_1.000000_g84634_i0 PRJNA1136505 91494 303 1 3.03 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 56.2 1.4e-6   NR XP_013762865.1 461836 g84634 i0 42.7 0.742574257425743 75 41 74.3 2 9 233 1133 1205 XP_013762865.1 scavenger receptor class B [Thecamonas trahens ATCC 50062] diamond 225 56.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30923679 30923679 PRJNA1136505_P_NODE_150694_length_243_cov_0.905882_g143834_i0 PRJNA1136505 150694 243 0.905882 2.20129326 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.2 1.12e-8   NR XP_013759333.1 461836 g143834 i0 55 0.740740740740741 60 27 74.1 0 63 242 619 678 XP_013759333.1 dynamin-A [Thecamonas trahens ATCC 50062] diamond 180 61.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31112818 31112818 PRJNA1136505_P_NODE_139795_length_247_cov_0.885057_g132935_i0 PRJNA1136505 139795 247 0.885057 2.18609079 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 76.3 4.45e-14   NR XP_013761142.1 461836 g132935 i0 55.9 3.66801619433198 59 26 71.7 0 182 6 83 141 XP_013761142.1 pyoverdine biosynthesis regulatory [Thecamonas trahens ATCC 50062] diamond 906 76.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32346911 32346911 PRJNA1136505_P_NODE_19419_length_1196_cov_2.285841_g13744_i0 PRJNA1136505 19419 1196 2.285841 27.33865836 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 325 5.409999999999998e-103   NR XP_013759182.1 461836 g13744 i0 48.7 0.938127090301003 374 181 93.1 8 1115 3 16 381 XP_013759182.1 peptidase S8 and S53 domain-containing protein [Thecamonas trahens ATCC 50062] diamond 1122 325 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32441863 32441863 PRJNA1136505_P_NODE_70919_length_350_cov_1.657040_g64059_i0 PRJNA1136505 70919 350 1.65704 5.79964 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 51.6 9.44e-5   NR XP_013761971.1 461836 g64059 i0 44.3 0.6 70 35 56.6 1 97 294 152 221 XP_013761971.1 uncharacterized protein AMSG_01365 [Thecamonas trahens ATCC 50062] diamond 210 51.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;