RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1134759", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1134759 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29364782 29364782 PRJNA1134759_P_NODE_32589_length_296_cov_2.098655_g32413_i0 PRJNA1134759 32589 296 2.098655 6.2120188 Bacillati 1783272 Bacteria Bacteria 47.8 7.83e-4   NR MFN8470544.1 2614250 g32413 i0 47.8 0.800675675675676 46 23 45.6 1 137 3 4 49 MFN8470544.1 HNH endonuclease signature motif containing protein [Caldilineaceae bacterium] diamond 237 47.8 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30438796 30438796 PRJNA1134759_P_NODE_56573_length_242_cov_0.923077_g56397_i0 PRJNA1134759 56573 242 0.923077 2.23384634 Bacillati 1783272 Bacteria Bacteria 75.9 7.74e-14   NR MEI7990263.1 2026724 g56397 i0 63.6 4.09090909090909 55 20 68.2 0 77 241 309 363 MEI7990263.1 phage/plasmid primase, P4 family [Chloroflexota bacterium] diamond 990 75.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;