RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1132896" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1132896 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4110626 4110626 PRJNA1132896_P_NODE_1184_length_478_cov_2.187654_g1093_i0 PRJNA1132896 1184 478 2.187654 10.45698612 Rotaria 231623 Rotifera other_Eukaryota 186 2.44e-57   NR CAF3796360.1 392030 g1093 i0 81.7 211.029288702929 104 19 65.3 0 8 319 27 130 CAF3796360.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 100872 186 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
19409508 19409508 PRJNA1132896_P_NODE_3156_length_316_cov_1.069959_g3065_i0 PRJNA1132896 3156 316 1.069959 3.38107044 Rotaria 231623 Rotifera other_Eukaryota 141 4.749999999999999e-38   NR CAF4522565.1 392032 g3065 i0 76.7 9.87341772151899 86 20 81.6 0 43 300 1 86 CAF4522565.1 unnamed protein product [Rotaria socialis] diamond 3120 141 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
24509595 24509595 PRJNA1132896_P_NODE_7020_length_250_cov_1.728814_g6929_i0 PRJNA1132896 7020 250 1.728814 4.322035 Brachionus 10194 Rotifera other_Eukaryota 83.2 2.33e-16   NR RNA23316.1 10195 g6929 i0 87.2 0.936 39 5 46.8 0 118 2 252 290 RNA23316.1 TBC1 domain family member 31 isoform X4, partial [Brachionus plicatilis] diamond 234 83.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28080940 28080940 PRJNA1132896_P_NODE_6365_length_255_cov_3.192308_g6274_i0 PRJNA1132896 6365 255 3.192308 8.1403854 Brachionus plicatilis 10195 Rotifera other_Eukaryota 61.2 7.2e-9   NR RNA13366.1 10195 g6274 i0 42.3 0.917647058823529 78 45 91.8 0 2 235 25 102 RNA13366.1 hypothetical protein BpHYR1_044339 [Brachionus plicatilis] diamond 234 61.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28396770 28396770 PRJNA1132896_P_NODE_1526_length_429_cov_0.865169_g1435_i0 PRJNA1132896 1526 429 0.865169 3.71157501 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 65.5 2.39e-9   NR CAF4013944.1 392030 g1435 i0 47.3 1.15384615384615 55 29 38.5 0 155 319 76 130 CAF4013944.1 unnamed protein product [Rotaria magnacalcarata] diamond 495 65.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29469988 29469988 PRJNA1132896_P_NODE_1630_length_416_cov_1.437318_g1539_i0 PRJNA1132896 1630 416 1.437318 5.97924288 Rotaria sordida 392033 Rotifera other_Eukaryota 85.5 2.85e-16   NR CAF4158666.1 392033 g1539 i0 33.8 4.26923076923077 148 64 89.4 6 44 415 404 541 CAF4158666.1 unnamed protein product, partial [Rotaria sordida] diamond 1776 85.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31966787 31966787 PRJNA1132896_P_NODE_7578_length_249_cov_0.875000_g7487_i0 PRJNA1132896 7578 249 0.875 2.17875 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 43.1 0.03   NR CAF1493717.1 1234261 g7487 i0 33.8 1.56626506024096 65 38 77.1 2 4 195 12 72 CAF1493717.1 unnamed protein product [Didymodactylos carnosus] diamond 390 43.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
32114318 32114318 PRJNA1132896_P_NODE_7138_length_250_cov_0.870056_g7047_i0 PRJNA1132896 7138 250 0.870056 2.17514 Metazoa 33208 Rotifera other_Eukaryota 121 7.439999999999999e-30   NR CAF1931538.1 392030 g7047 i0 67.5 10.956 83 27 99.6 0 2 250 1166 1248 CAF1931538.1 unnamed protein product [Rotaria magnacalcarata] diamond 2739 122 0.991803278688525 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;