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contig_metadata

21 rows where bioproject = "PRJNA1132896" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 21 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5386809 5386809 PRJNA1132896_P_NODE_2245_length_364_cov_1.034364_g2154_i0 PRJNA1132896 2245 364 1.034364 3.76508496 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 1e-27   NR KAI9907769.1 230839 g2154 i0 72.4 1.92857142857143 76 21 62.6 0 132 359 23 98 KAI9907769.1 hypothetical protein PsorP6_003339 [Peronosclerospora sorghi] diamond 702 109 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
7936705 7936705 PRJNA1132896_P_NODE_8627_length_246_cov_0.890173_g8536_i0 PRJNA1132896 8627 246 0.890173 2.18982558 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 169 1.8199999999999993e-46   NR KAJ0409334.1 114742 g8536 i0 92.7 135 82 6 100 0 1 246 743 824 KAJ0409334.1 hypothetical protein ATCC90586_000571 [Pythium insidiosum] diamond 33210 169 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
16334182 16334182 PRJNA1132896_P_NODE_4393_length_283_cov_1.833333_g4302_i0 PRJNA1132896 4393 283 1.833333 5.18833239 Phytophthora fragariaefolia 1490495 SAR_Eukaryotes SAR_Eukaryotes 88.6 1.97e-18   NR GMF48105.1 1490495 g4302 i0 62.9 0.657243816254417 62 21 65.7 1 96 281 9 68 GMF48105.1 unnamed protein product [Phytophthora fragariaefolia] diamond 186 88.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
16860833 16860833 PRJNA1132896_P_NODE_6114_length_259_cov_1.419355_g6023_i0 PRJNA1132896 6114 259 1.419355 3.67612945 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 146 4.52e-43   NR KAF0727766.1 100861 g6023 i0 85.2 6.62548262548263 81 12 93.8 0 250 8 1 81 KAF0727766.1 hypothetical protein Ae201684_014280 [Aphanomyces euteiches] diamond 1716 147 0.993197278911565 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
20158171 20158171 PRJNA1132896_P_NODE_3716_length_295_cov_2.081081_g3625_i0 PRJNA1132896 3716 295 2.081081 6.13918895 root 1 Root_unresolved Root_unresolved 164 1.41e-44   NR XP_008610586.1 1156394 g3625 i0 79.4 11.8271186440678 97 20 98.6 0 293 3 4 100 XP_008610586.1 hypothetical protein SDRG_06578 [Saprolegnia diclina VS20] diamond 3489 164 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
21960438 21960438 PRJNA1132896_P_NODE_7098_length_250_cov_0.870056_g7007_i0 PRJNA1132896 7098 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 91.3 2.61e-21   NR CAI5712365.1 162125 g7007 i0 54.8 16.704 73 32 87.6 1 32 250 5 76 CAI5712365.1 unnamed protein product [Hyaloperonospora brassicae] diamond 4176 91.7 0.995637949836423 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
27122303 27122303 PRJNA1132896_P_NODE_3362_length_308_cov_1.336170_g3271_i0 PRJNA1132896 3362 308 1.33617 4.1154036 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 1.79e-28   NR TMW61584.1 41045 g3271 i0 59.4 6.6525974025974 96 38 92.5 1 299 15 3 98 TMW61584.1 hypothetical protein Poli38472_012775 [Pythium oligandrum] diamond 2049 111 0.990990990990991 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27691598 27691598 PRJNA1132896_P_NODE_3204_length_314_cov_1.834025_g3113_i0 PRJNA1132896 3204 314 1.834025 5.7588385 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 48.1 9.64e-4   NR XP_024579005.1 4781 g3113 i0 34.1 2.52229299363057 85 54 79.3 1 3 251 64 148 XP_024579005.1 amp-binding protein [Plasmopara halstedii] diamond 792 48.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
27891449 27891449 PRJNA1132896_P_NODE_1165_length_482_cov_1.217604_g1074_i0 PRJNA1132896 1165 482 1.217604 5.86885128 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 273 2.819999999999999e-87   NR CAI5721072.1 162125 g1074 i0 80.6 3.97717842323651 160 30 99.6 1 481 2 75 233 CAI5721072.1 unnamed protein product [Hyaloperonospora brassicae] diamond 1917 273 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
28954455 28954455 PRJNA1132896_P_NODE_9228_length_244_cov_0.900585_g9137_i0 PRJNA1132896 9228 244 0.900585 2.1974274 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00811   NR XP_067817214.1 4779 g9137 i0 34.8 3.41803278688525 69 37 77.5 2 210 22 28 94 XP_067817214.1 hypothetical protein CCR75_001961 [Bremia lactucae] diamond 834 44.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
29154835 29154835 PRJNA1132896_P_NODE_8969_length_245_cov_0.883721_g8878_i0 PRJNA1132896 8969 245 0.883721 2.16511645 Phytophthora nicotianae P1569 1317065 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00605   NR ETI35468.1 1317065 g8878 i0 37 0.661224489795918 54 30 66.1 1 22 183 2684 2733 ETI35468.1 hypothetical protein F443_18193 [Phytophthora nicotianae P1569] diamond 162 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
30007329 30007329 PRJNA1132896_P_NODE_6951_length_251_cov_0.865169_g6860_i0 PRJNA1132896 6951 251 0.865169 2.17157419 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 95.1 1.52e-20   NR RLN92073.1 2483409 g6860 i0 51.3 2.7609561752988 80 30 84.9 1 246 34 310 389 RLN92073.1 hypothetical protein BBJ28_00021708 [Nothophytophthora sp. Chile5] diamond 693 95.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
30691242 30691242 PRJNA1132896_P_NODE_10273_length_241_cov_0.916667_g10182_i0 PRJNA1132896 10273 241 0.916667 2.20916747 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 123 8.32e-31   NR CCI41595.1 65357 g10182 i0 72.2 11.5269709543568 79 22 98.3 0 239 3 136 214 CCI41595.1 unnamed protein product [Albugo candida] diamond 2778 123 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
30955237 30955237 PRJNA1132896_P_NODE_5094_length_273_cov_1.850000_g5003_i0 PRJNA1132896 5094 273 1.85 5.0505 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 72 2.7e-12   NR XP_008619044.1 1156394 g5003 i0 41 1.7032967032967 78 46 85.7 0 241 8 768 845 XP_008619044.1 hypothetical protein SDRG_14673 [Saprolegnia diclina VS20] diamond 465 72 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
31682002 31682002 PRJNA1132896_P_NODE_537_length_706_cov_3.529226_g448_i0 PRJNA1132896 537 706 3.529226 24.91633556 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 154 6.5599999999999986e-40   NR KAI9916449.1 230839 g448 i0 58.6 4.48725212464589 128 53 54.4 0 392 9 8 135 KAI9916449.1 hypothetical protein PsorP6_017147 [Peronosclerospora sorghi] diamond 3168 154 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
31871917 31871917 PRJNA1132896_P_NODE_4277_length_285_cov_1.334906_g4186_i0 PRJNA1132896 4277 285 1.334906 3.8044821 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 56.6 8.2e-7   NR CAH0514662.1 622444 g4186 i0 47.4 1.02105263157895 57 28 60 1 285 115 199 253 CAH0514662.1 unnamed protein product [Peronospora belbahrii] diamond 291 56.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
31892697 31892697 PRJNA1132896_P_NODE_6077_length_259_cov_3.059140_g5986_i0 PRJNA1132896 6077 259 3.05914 7.9231726 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0335   NR KAG1694300.1 4784 g5986 i0 41.7 4.54054054054054 60 32 66 1 87 257 1395 1454 KAG1694300.1 hypothetical protein DVH05_021652 [Phytophthora capsici] diamond 1176 43.5 0.990804597701149 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
32050897 32050897 PRJNA1132896_P_NODE_7838_length_248_cov_0.880000_g7747_i0 PRJNA1132896 7838 248 0.88 2.1824 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 130 4.08e-33   NR DAZ94775.1 4803 g7747 i0 72 10.9112903225806 82 23 99.2 0 3 248 34 115 DAZ94775.1 TPA: hypothetical protein N0F65_012355 [Lagenidium giganteum] diamond 2706 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32272601 32272601 PRJNA1132896_P_NODE_4538_length_281_cov_2.028846_g4447_i0 PRJNA1132896 4538 281 2.028846 5.70105726 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 101 9.69e-24   NR KAI9989638.1 4787 g4447 i0 60.2 14.2526690391459 83 33 88.6 0 252 4 86 168 KAI9989638.1 hypothetical protein PInf_019923 [Phytophthora infestans] diamond 4005 102 0.990196078431373 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32409987 32409987 PRJNA1132896_P_NODE_6219_length_257_cov_2.119565_g6128_i0 PRJNA1132896 6219 257 2.119565 5.44728205 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 144 2.22e-40   NR KAF0745081.1 100861 g6128 i0 75 4.93774319066148 84 21 98.1 0 257 6 156 239 KAF0745081.1 hypothetical protein Ae201684_000654 [Aphanomyces euteiches] diamond 1269 144 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32630851 32630851 PRJNA1132896_P_NODE_3440_length_305_cov_1.327586_g3349_i0 PRJNA1132896 3440 305 1.327586 4.0491373 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 155 4.28e-44   NR KAG9404282.1 112091 g3349 i0 74 5.9016393442623 100 26 98.4 0 3 302 222 321 KAG9404282.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Aphanomyces cochlioides] diamond 1800 155 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;