RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1132896" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13037304 13037304 PRJNA1132896_P_NODE_10271_length_241_cov_0.916667_g10180_i0 PRJNA1132896 10271 241 0.916667 2.20916747 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|66359733|ref|XM_627045.1| 353152 g10180 i0 100 0.116182572614108 28 0 12 0 22 49 658 685 Cryptosporidium parvum Iowa II hypothetical protein (cgd8_1380) partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
30038731 30038731 PRJNA1132896_P_NODE_8791_length_245_cov_0.895349_g8700_i0 PRJNA1132896 8791 245 0.895349 2.19360505 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 52 1.62e-5   NR KAF7458461.1 83540 g8700 i0 33.3 0.955102040816327 78 52 95.5 0 8 241 3 80 KAF7458461.1 Synaptobrevin family protein [Cryptosporidium felis] diamond 234 52 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;