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contig_metadata

21 rows where bioproject = "PRJNA1132896", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

  • Pseudomonadati · 21 ✖

bioproject 1

  • PRJNA1132896 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6134592 6134592 PRJNA1132896_P_NODE_5265_length_271_cov_1.383838_g5174_i0 PRJNA1132896 5265 271 1.383838 3.75020098 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 106 4.7e-26   NR MBI5579332.1 2026735 g5174 i0 96.7 0.664206642066421 60 2 66.4 0 90 269 1 60 MBI5579332.1 slipin family protein [Deltaproteobacteria bacterium] diamond 180 106 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
11762209 11762209 PRJNA1132896_P_NODE_1390_length_446_cov_1.364611_g1299_i0 PRJNA1132896 1390 446 1.364611 6.08616506 Polyangium aurulentum 2567896 Bacteria Bacteria 641 2.0099999999999993e-179   NTclustered gi|2235996827|gb|CP079217.1| 2567896 g1299 i0 92.793 186.143497757848 444 31 99 1 1 444 442631 442189 Polyangium aurulentum strain SDU3-1 chromosome, complete genome blastn 83020 641 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium aurulentum
20685057 20685057 PRJNA1132896_P_NODE_9417_length_243_cov_1.358824_g9326_i0 PRJNA1132896 9417 243 1.358824 3.30194232 Chondromyces crocatus 52 Bacteria Bacteria 351 1.93e-92   NTclustered gi|169977285|emb|AM946600.1| 52 g9326 i0 93.966 136.493827160494 232 14 95 0 1 232 2173 1942 Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 blastn 33168 351 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
21433664 21433664 PRJNA1132896_P_NODE_5517_length_267_cov_1.587629_g5426_i0 PRJNA1132896 5517 267 1.587629 4.23896943 Pendulispora 3375062 Bacteria Bacteria 361 3.57e-95   NTclustered gi|2698035964|gb|CP089984.1| 2741071 g5426 i0 91.386 145.985018726592 267 18 99 3 2 267 7191391 7191653 Pendulispora albinea strain MSr11954 chromosome, complete genome blastn 38978 363 0.994490358126722 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora albinea
27027736 27027736 PRJNA1132896_P_NODE_9882_length_242_cov_0.911243_g9791_i0 PRJNA1132896 9882 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 42.7 0.0274   NR MDX2092204.1 2212474 g9791 i0 37.5 1.30165289256198 48 28 59.5 1 14 157 10 55 MDX2092204.1 HupE/UreJ family protein [Kofleriaceae bacterium] diamond 315 42.7 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
27133182 27133182 PRJNA1132896_P_NODE_602_length_663_cov_1.698305_g513_i0 PRJNA1132896 602 663 1.698305 11.25976215 Myxococcales bacterium 2026763 Bacteria Bacteria 76.3 5.93e-12   NR MSP92154.1 2026763 g513 i0 32.7 4.05882352941176 165 89 73.3 7 175 660 1041 1186 MSP92154.1 hypothetical protein [Myxococcales bacterium] diamond 2691 76.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27291650 27291650 PRJNA1132896_P_NODE_9343_length_244_cov_0.894737_g9252_i0 PRJNA1132896 9343 244 0.894737 2.18315828 Chondromyces apiculatus 51 Bacteria Bacteria 55.5 1.22e-6   NR WP_044250665.1 51 g9252 i0 52 1.22950819672131 50 23 61.5 1 151 2 12 60 WP_044250665.1 acetylglutamate kinase [Chondromyces apiculatus] diamond 300 55.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces apiculatus
27418242 27418242 PRJNA1132896_P_NODE_10203_length_241_cov_0.916667_g10112_i0 PRJNA1132896 10203 241 0.916667 2.20916747 Myxococcota bacterium 2818507 Bacteria Bacteria 43.5 0.0181   NR MEM6731053.1 2818507 g10112 i0 32.6 1.07053941908714 86 50 97.1 1 3 236 211 296 MEM6731053.1 hypothetical protein [Myxococcota bacterium] diamond 258 43.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
29112198 29112198 PRJNA1132896_P_NODE_3768_length_293_cov_1.586364_g3677_i0 PRJNA1132896 3768 293 1.586364 4.64804652 Myxococcales 29 Bacteria Bacteria 112 2.13e-26   NR WP_002611940.1 41 g3677 i0 51.2 7.10580204778157 86 42 88.1 0 3 260 577 662 WP_002611940.1 lysyl oxidase family protein [Stigmatella aurantiaca] diamond 2082 112 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Stigmatella Stigmatella aurantiaca
30101794 30101794 PRJNA1132896_P_NODE_9712_length_242_cov_1.822485_g9621_i0 PRJNA1132896 9712 242 1.822485 4.4104137 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 79.3 4.75e-15   NR MBI5512447.1 2026735 g9621 i0 52.9 1.05371900826446 85 31 96.7 3 242 9 263 345 MBI5512447.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 255 79.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30291920 30291920 PRJNA1132896_P_NODE_9572_length_243_cov_0.905882_g9481_i0 PRJNA1132896 9572 243 0.905882 2.20129326 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 43.9 0.0146   NR MBI5515920.1 2026735 g9481 i0 32.9 1.37037037037037 76 51 93.8 0 15 242 295 370 MBI5515920.1 acetoacetate decarboxylase family protein [Deltaproteobacteria bacterium] diamond 333 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31101933 31101933 PRJNA1132896_P_NODE_355_length_883_cov_2.081481_g279_i0 PRJNA1132896 355 883 2.081481 18.37947723 Bacteria 2 Bacteria Bacteria 110 2.62e-24   NR MDP3238743.1 2026763 g279 i0 36.1 1.57984144960362 155 90 52.3 3 734 273 142 288 MDP3238743.1 CAP domain-containing protein [Myxococcales bacterium] diamond 1395 111 0.990990990990991 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31133400 31133400 PRJNA1132896_P_NODE_8035_length_247_cov_1.770115_g7944_i0 PRJNA1132896 8035 247 1.770115 4.37218405 Myxococcia 32015 Bacteria Bacteria 50.4 7.41e-5   NR HSO33295.1 1971228 g7944 i0 58.5 2.18623481781377 41 17 49.8 0 123 1 417 457 HSO33295.1 hypothetical protein [Labilithrix sp.] diamond 540 50.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
31302646 31302646 PRJNA1132896_P_NODE_135_length_1352_cov_3.272088_g100_i0 PRJNA1132896 135 1352 3.272088 44.23862976 Polyangiaceae bacterium 2268199 Bacteria Bacteria 375 4.68e-120   NR MBK9260476.1 2268199 g100 i0 47 2.97559171597633 447 215 97.2 11 1317 4 131 564 MBK9260476.1 hypothetical protein [Polyangiaceae bacterium] diamond 4023 375 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31366114 31366114 PRJNA1132896_P_NODE_8296_length_247_cov_0.885057_g8205_i0 PRJNA1132896 8296 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 122 3.0199999999999997e-32   NR MBI2394608.1 2026735 g8205 i0 71.6 0.983805668016194 81 23 98.4 0 245 3 104 184 MBI2394608.1 succinate dehydrogenase cytochrome b558 subunit [Deltaproteobacteria bacterium] diamond 243 122 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31650386 31650386 PRJNA1132896_P_NODE_3797_length_292_cov_2.013699_g3706_i0 PRJNA1132896 3797 292 2.013699 5.88000108 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 135 9.34e-36   NR UCB49634.1 2026735 g3706 i0 59.7 2.44520547945205 119 24 97.6 1 6 290 119 237 UCB49634.1 MAG: GAF domain-containing protein [Deltaproteobacteria bacterium] diamond 714 135 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31650389 31650389 PRJNA1132896_P_NODE_5577_length_266_cov_2.316062_g5486_i0 PRJNA1132896 5577 266 2.316062 6.16072492 Labilithrix luteola 1391654 Bacteria Bacteria 115 6.27e-29   NR WP_146647721.1 1391654 g5486 i0 59.1 0.992481203007519 88 36 99.2 0 3 266 238 325 WP_146647721.1 nuclear transport factor 2 family protein [Labilithrix luteola] diamond 264 115 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
31998583 31998583 PRJNA1132896_P_NODE_658_length_638_cov_1.707965_g568_i0 PRJNA1132896 658 638 1.707965 10.8968167 Myxococcota bacterium 2818507 Bacteria Bacteria 87.8 4.96e-16   NR HOU52499.1 2818507 g568 i0 35.4 0.851097178683386 181 78 68.2 8 73 507 491 668 HOU52499.1 MopE-related protein [Myxococcota bacterium] diamond 543 87.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32050896 32050896 PRJNA1132896_P_NODE_1478_length_434_cov_1.490305_g1387_i0 PRJNA1132896 1478 434 1.490305 6.4679237 Bacteria 2 Bacteria Bacteria 60.1 2.39e-7   NR HEX5062632.1 2212474 g1387 i0 56 2.5852534562212 50 17 34.6 1 369 220 106 150 HEX5062632.1 choice-of-anchor L domain-containing protein [Kofleriaceae bacterium] diamond 1122 60.5 0.993388429752066 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
32378333 32378333 PRJNA1132896_P_NODE_5879_length_262_cov_1.629630_g5788_i0 PRJNA1132896 5879 262 1.62963 4.2696306 Polyangia bacterium 3058050 Bacteria Bacteria 53.5 6.33e-6   NR MFO0620122.1 3058050 g5788 i0 42.6 0.698473282442748 61 34 69.8 1 259 77 75 134 MFO0620122.1 MBL fold metallo-hydrolase [Polyangia bacterium] diamond 183 53.5 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
32505007 32505007 PRJNA1132896_P_NODE_7099_length_250_cov_0.870056_g7008_i0 PRJNA1132896 7099 250 0.870056 2.17514 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 53.5 6.24e-6   NR MBN8554511.1 2026735 g7008 i0 37.5 0.768 64 40 76.8 0 194 3 4 67 MBN8554511.1 HDIG domain-containing protein [Deltaproteobacteria bacterium] diamond 192 53.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;