RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1132896", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26912061 26912061 PRJNA1132896_P_NODE_9562_length_243_cov_0.905882_g9471_i0 PRJNA1132896 9562 243 0.905882 2.20129326 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 52.4 1.47e-5   NR KAJ8026943.1 206669 g9471 i0 47.9 3.50617283950617 48 25 59.3 0 146 3 85 132 KAJ8026943.1 Mitogen-activated protein kinase kinase kinase 7 [Holothuria leucospilota] diamond 852 52.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
29217913 29217913 PRJNA1132896_P_NODE_2889_length_327_cov_2.011811_g2798_i0 PRJNA1132896 2889 327 2.011811 6.57862197 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 60.5 6.38e-8   NR KAJ8024046.1 206669 g2798 i0 39.4 1.97247706422018 71 41 65.1 1 1 213 868 936 KAJ8024046.1 Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta [Holothuria leucospilota] diamond 645 60.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32093438 32093438 PRJNA1132896_P_NODE_6698_length_251_cov_1.679775_g6607_i0 PRJNA1132896 6698 251 1.679775 4.21623525 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 48.1 5.17e-4   NR PIK35052.1 307972 g6607 i0 58.6 0.764940239043825 29 12 34.7 0 97 183 206 234 PIK35052.1 putative multiple epidermal growth factor-like domains protein 8 [Apostichopus japonicus] diamond 192 48.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
32441833 32441833 PRJNA1132896_P_NODE_3039_length_321_cov_0.931452_g2948_i0 PRJNA1132896 3039 321 0.931452 2.98996092 Diadema antillarum 105358 Echinodermata other_Eukaryota 68.9 6.16e-11   NR XP_071501425.1 105358 g2948 i0 42.3 0.906542056074766 97 56 90.7 0 293 3 392 488 XP_071501425.1 uncharacterized protein [Diadema antillarum] diamond 291 68.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;