RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1132896", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19409535 19409535 PRJNA1132896_P_NODE_5976_length_261_cov_1.638298_g5885_i0 PRJNA1132896 5976 261 1.638298 4.27595778 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.024   NTclustered gi|2920003563|emb|OZ238869.1| 1046305 g5885 i0 100 0.10727969348659 28 0 11 0 38 65 1626218 1626191 Ailoscolex lacteospumosus genome assembly, chromosome: 10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
20158197 20158197 PRJNA1132896_P_NODE_8136_length_247_cov_0.885057_g8045_i0 PRJNA1132896 8136 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 86.7 1.39e-17   NR XP_009011105.1 6412 g8045 i0 52.6 5.68421052631579 78 36 94.7 1 235 2 13 89 XP_009011105.1 hypothetical protein HELRODRAFT_97056 [Helobdella robusta] diamond 1404 87 0.996551724137931 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
26995894 26995894 PRJNA1132896_P_NODE_5622_length_266_cov_1.284974_g5531_i0 PRJNA1132896 5622 266 1.284974 3.41803084 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.1 2.33e-6   NR KAK2145845.1 53620 g5531 i0 34.7 8.25563909774436 98 54 99.2 1 3 266 1501 1598 KAK2145845.1 hypothetical protein LSH36_652g01043 [Paralvinella palmiformis] diamond 2196 55.5 0.992792792792793 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;