RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1132896", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9211615 9211615 PRJNA1132896_P_NODE_3068_length_319_cov_1.504065_g2977_i0 PRJNA1132896 3068 319 1.504065 4.79796735 Paraphysoderma sedebokerense 1500003 Fungi Fungi 142 5.8499999999999994e-37   NR KAI9144847.1 1500003 g2977 i0 63.8 5.95297805642633 105 37 98.7 1 3 317 148 251 KAI9144847.1 ATP synthase alpha/beta family, nucleotide-binding domain-containing protein [Paraphysoderma sedebokerense] diamond 1899 142 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
28101588 28101588 PRJNA1132896_P_NODE_8545_length_246_cov_0.890173_g8454_i0 PRJNA1132896 8545 246 0.890173 2.18982558 Blastocladiella 4807 Fungi Fungi 66.2 2.02e-10   NR KAI9220162.1 64508 g8454 i0 42.2 2.01219512195122 83 46 98.8 1 2 244 710 792 KAI9220162.1 chitin synthase-domain-containing protein [Blastocladiella britannica] diamond 495 66.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
29028569 29028569 PRJNA1132896_P_NODE_2348_length_357_cov_1.559859_g2257_i0 PRJNA1132896 2348 357 1.559859 5.56869663 Paraphysoderma sedebokerense 1500003 Fungi Fungi 113 2.75e-26   NR KAI9142081.1 1500003 g2257 i0 47.9 2.9327731092437 117 57 95.8 2 355 14 387 502 KAI9142081.1 acyl-CoA synthetase [Paraphysoderma sedebokerense] diamond 1047 113 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31650385 31650385 PRJNA1132896_P_NODE_10677_length_226_cov_2.013072_g10586_i0 PRJNA1132896 10677 226 2.013072 4.54954272 Paraphysoderma sedebokerense 1500003 Fungi Fungi 42.7 0.0315   NR KAI9144974.1 1500003 g10586 i0 31 0.942477876106195 71 49 94.2 0 13 225 1228 1298 KAI9144974.1 hypothetical protein BKA69DRAFT_648959 [Paraphysoderma sedebokerense] diamond 213 42.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31745366 31745366 PRJNA1132896_P_NODE_9257_length_244_cov_0.900585_g9166_i0 PRJNA1132896 9257 244 0.900585 2.1974274 Paraphysoderma sedebokerense 1500003 Fungi Fungi 70.1 6.09e-12   NR KAI9137650.1 1500003 g9166 i0 39.8 1.02049180327869 83 46 97.1 1 239 3 122 204 KAI9137650.1 eukaryotic translation initiation factor 3 subunit I-like protein [Paraphysoderma sedebokerense] diamond 249 70.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
32872043 32872043 PRJNA1132896_P_NODE_4040_length_288_cov_1.767442_g3949_i0 PRJNA1132896 4040 288 1.767442 5.09023296 Fungi 4751 Fungi Fungi 145 7.53e-42   NR ORZ35599.1 765915 g3949 i0 65.3 17.0104166666667 95 33 99 0 287 3 3 97 ORZ35599.1 ribosomal L18ae/LX protein domain-domain-containing protein [Catenaria anguillulae PL171] diamond 4899 145 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;