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contig_metadata

18 rows where bioproject = "PRJNA1132896" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 18 ✖

bioproject 1

  • PRJNA1132896 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
283602 283602 PRJNA1132896_P_NODE_101_length_1537_cov_6.016393_g77_i1 PRJNA1132896 101 1537 6.016393 92.47196041 Eukaryota 2759 Plants Plants 620 8.9e-208   NR PRW51008.1 3076 g77 i1 63.3 15.2849707221861 469 166 91.5 2 1452 46 744 1206 PRW51008.1 eukaryotic translation elongation factor 1 alpha 2 [Chlorella sorokiniana] diamond 23493 623 0.995184590690209 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
2834252 2834252 PRJNA1132896_P_NODE_10223_length_241_cov_0.916667_g10132_i0 PRJNA1132896 10223 241 0.916667 2.20916747 Chlorella variabilis 554065 Plants Plants 104 5.9e-18   NTclustered gi|552815320|ref|XM_005844353.1| 554065 g10132 i0 82.5 0.49792531120332 120 19 49 2 103 221 300 418 Chlorella variabilis hypothetical protein (CHLNCDRAFT_32566) mRNA, complete cds blastn 120 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
5386800 5386800 PRJNA1132896_P_NODE_1485_length_433_cov_2.105556_g1394_i0 PRJNA1132896 1485 433 2.105556 9.11705748 Pedinophyceae sp. YPF-7 765719 Plants Plants 177 4.31e-54   NR CAG9462620.1 765719 g1394 i0 63.3 10.5935334872979 139 49 94.9 1 17 427 1 139 CAG9462620.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 4587 177 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
6661475 6661475 PRJNA1132896_P_NODE_2786_length_333_cov_1.176923_g2695_i0 PRJNA1132896 2786 333 1.176923 3.91915359 Eukaryota 2759 Plants Plants 169 2.97e-51   NR WIA33580.1 3088 g2695 i0 80.4 23.027027027027 107 20 96.4 1 323 3 40 145 WIA33580.1 hypothetical protein OEZ86_006704 [Tetradesmus obliquus] diamond 7668 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
6661507 6661507 PRJNA1132896_P_NODE_6146_length_258_cov_2.335135_g6055_i0 PRJNA1132896 6146 258 2.335135 6.0246483 Jenufa perforata 993091 Plants Plants 78.7 3.87e-10   NTclustered gi|1829768140|ref|NC_046779.1| 993091 g6055 i0 92.857 0.217054263565891 56 1 21 3 35 89 19706 19759 Jenufa perforata culture CAUP:H8101 mitochondrion, complete genome blastn 56 78.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa perforata
13037320 13037320 PRJNA1132896_P_NODE_3111_length_317_cov_4.118852_g3020_i0 PRJNA1132896 3111 317 4.118852 13.05676084 Auxenochlorella pyrenoidosa 3078 Plants Plants 569 6.629999999999998e-158   NTclustered gi|1201359271|gb|MF040793.1| 3078 g3020 i0 99.054 102.261829652997 317 3 100 0 1 317 1702 1386 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 32417 569 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
17609416 17609416 PRJNA1132896_P_NODE_10034_length_241_cov_2.666667_g9943_i0 PRJNA1132896 10034 241 2.666667 6.42666747 root 1 Root_unresolved Root_unresolved 144 5.35e-39   NR WIA14246.1 3088 g9943 i0 82.5 22.2199170124481 80 14 99.6 0 241 2 52 131 WIA14246.1 hypothetical protein OEZ85_002782 [Tetradesmus obliquus] diamond 5355 144 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
21433667 21433667 PRJNA1132896_P_NODE_597_length_666_cov_1.775717_g508_i0 PRJNA1132896 597 666 1.775717 11.82627522 Trebouxia sp. A1-2 2608996 Plants Plants 263 2.03e-83   NR KAA6425335.1 2608996 g508 i0 61.8 9.76126126126126 217 82 97.7 1 666 16 128 343 KAA6425335.1 MAG: 60S ribosomal L4-like [Trebouxia sp. A1-2] diamond 6501 263 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
23235933 23235933 PRJNA1132896_P_NODE_4539_length_281_cov_2.014423_g4448_i0 PRJNA1132896 4539 281 2.014423 5.66052863 Astrephomene gubernaculifera 47775 Plants Plants 147 2.02e-40   NR GFR43524.1 47775 g4448 i0 72.2 26.0391459074733 90 25 96.1 0 270 1 3 92 GFR43524.1 hypothetical protein Agub_g4619, partial [Astrephomene gubernaculifera] diamond 7317 147 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
24509539 24509539 PRJNA1132896_P_NODE_100_length_1537_cov_6.747951_g77_i0 PRJNA1132896 100 1537 6.747951 103.71600687 Eukaryota 2759 Plants Plants 620 8.9e-208   NR PRW51008.1 3076 g77 i0 63.3 15.2849707221861 469 166 91.5 2 1452 46 744 1206 PRW51008.1 eukaryotic translation elongation factor 1 alpha 2 [Chlorella sorokiniana] diamond 23493 623 0.995184590690209 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
24509584 24509584 PRJNA1132896_P_NODE_5140_length_273_cov_1.145000_g5049_i0 PRJNA1132896 5140 273 1.145 3.12585 Eukaryota 2759 Plants Plants 123 1.9799999999999996e-31   NR XP_011400462.1 3075 g5049 i0 68.1 35.956043956044 91 28 100 1 273 1 4 93 XP_011400462.1 60S ribosomal protein L4-1 [Auxenochlorella protothecoides] diamond 9816 123 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
26912052 26912052 PRJNA1132896_P_NODE_2822_length_331_cov_1.193798_g2731_i0 PRJNA1132896 2822 331 1.193798 3.95147138 Chlamydomonas incerta 51695 Plants Plants 84 3.73e-16   NR KAG2440245.1 51695 g2731 i0 54.7 2.69184290030211 75 34 68 0 50 274 33 107 KAG2440245.1 hypothetical protein HXX76_004357 [Chlamydomonas incerta] diamond 891 84 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
27228279 27228279 PRJNA1132896_P_NODE_8263_length_247_cov_0.885057_g8172_i0 PRJNA1132896 8263 247 0.885057 2.18609079 Chlamydomonas sp. UWO 241 1653778 Plants Plants 86.7 1.43e-17   NR KAG1669781.1 1653778 g8172 i0 48.1 1.96761133603239 81 42 98.4 0 244 2 1368 1448 KAG1669781.1 hypothetical protein FOA52_001611 [Chlamydomonas sp. UWO 241] diamond 486 86.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
27438930 27438930 PRJNA1132896_P_NODE_1363_length_450_cov_1.403183_g1272_i0 PRJNA1132896 1363 450 1.403183 6.3143235 Eukaryota 2759 Plants Plants 88.2 2.49e-17   NR XP_005650031.1 574566 g1272 i0 38.9 1.48 113 68 75.3 1 339 1 234 345 XP_005650031.1 hypothetical protein COCSUDRAFT_46736 [Coccomyxa subellipsoidea C-169] diamond 666 88.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
28112505 28112505 PRJNA1132896_P_NODE_4145_length_287_cov_1.196262_g4054_i0 PRJNA1132896 4145 287 1.196262 3.43327194 Coccomyxa subellipsoidea 248742 Plants Plants 63.2 1.2e-10   NR KAK9919047.1 248742 g4054 i0 42 1.44250871080139 69 40 72.1 0 286 80 13 81 KAK9919047.1 hypothetical protein WJX75_008974 [Coccomyxa subellipsoidea] diamond 414 63.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
31892696 31892696 PRJNA1132896_P_NODE_2657_length_339_cov_3.917293_g2566_i0 PRJNA1132896 2657 339 3.917293 13.27962327 Coccomyxa 41891 Plants Plants 153 1.5499999999999996e-40   NR KAK9915260.1 248742 g2566 i0 74.3 13 113 27 98.2 2 334 2 683 795 KAK9915260.1 hypothetical protein WJX75_006836 [Coccomyxa subellipsoidea] diamond 4407 153 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32241017 32241017 PRJNA1132896_P_NODE_6558_length_253_cov_1.283333_g6467_i0 PRJNA1132896 6558 253 1.283333 3.24683249 Coccomyxa 41891 Plants Plants 81.3 1.26e-16   NR CAL8468672.1 1965095 g6467 i0 43.5 3.99604743083004 92 44 99.6 1 252 1 6 97 CAL8468672.1 g8212 [Coccomyxa elongata] diamond 1011 81.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
32819974 32819974 PRJNA1132896_P_NODE_1000_length_516_cov_4.864560_g909_i0 PRJNA1132896 1000 516 4.86456 25.1011296 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 221 3.37e-69   NR KAG7670504.1 1650286 g909 i0 65.7 3.88372093023256 166 56 96.5 1 498 1 23 187 KAG7670504.1 hypothetical protein KSW81_003066 [Chlorella desiccata (nom. nud.)] diamond 2004 221 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;