RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1132896", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28617954 28617954 PRJNA1132896_P_NODE_6967_length_251_cov_0.865169_g6876_i0 PRJNA1132896 6967 251 0.865169 2.17157419 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 91.7 2.58e-19   NR ETO13004.1 46433 g6876 i0 58.7 1.9003984063745 75 31 89.6 0 251 27 971 1045 ETO13004.1 DEAD/DEAH box helicase, partial [Reticulomyxa filosa] diamond 477 91.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30891979 30891979 PRJNA1132896_P_NODE_10314_length_241_cov_0.916667_g10223_i0 PRJNA1132896 10314 241 0.916667 2.20916747 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 77.4 2.53e-15   NR ETO23171.1 46433 g10223 i0 46.3 1.64315352697095 67 36 83.4 0 211 11 108 174 ETO23171.1 glycosyltransferase [Reticulomyxa filosa] diamond 396 77.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;