RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1132896", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1132896 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32251996 32251996 PRJNA1132896_P_NODE_7238_length_250_cov_0.870056_g7147_i0 PRJNA1132896 7238 250 0.870056 2.17514 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 110 5.39e-26   NR HOD12566.1 2035772 g7147 i0 64.5 2.748 76 27 91.2 0 22 249 322 397 HOD12566.1 leucyl aminopeptidase [Candidatus Omnitrophota bacterium] diamond 687 110 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32505009 32505009 PRJNA1132896_P_NODE_9399_length_243_cov_1.647059_g9308_i0 PRJNA1132896 9399 243 1.647059 4.00235337 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 67.8 5.78e-11   NR MFH0985528.1 2035772 g9308 i0 64.7 0.62962962962963 51 18 63 0 153 1 1 51 MFH0985528.1 cation-transporting P-type ATPase [Candidatus Omnitrophota bacterium] diamond 153 67.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;