RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1132896", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA1132896 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4110675 4110675 PRJNA1132896_P_NODE_7244_length_250_cov_0.870056_g7153_i0 PRJNA1132896 7244 250 0.870056 2.17514 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.006   NTclustered gi|2794971584|ref|XM_067862820.1| 2049356 g7153 i0 96.875 0.128 32 1 13 0 162 193 8576 8607 Monocercomonoides exilis uncharacterized protein (MONOS_10375), mRNA blastn 32 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26721735 26721735 PRJNA1132896_P_NODE_6301_length_256_cov_1.683060_g6210_i0 PRJNA1132896 6301 256 1.68306 4.3086336 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 47.4 0.00109   NR KAJ4456954.1 342808 g6210 i0 37.5 0.9375 80 38 87.9 3 252 28 7852 7924 KAJ4456954.1 putative low-density lipoprotein receptor-related protein [Paratrimastix pyriformis] diamond 240 47.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28933600 28933600 PRJNA1132896_P_NODE_1448_length_437_cov_4.879121_g1357_i0 PRJNA1132896 1448 437 4.879121 21.32175877 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 79 4.54e-14   NR KAJ4459686.1 342808 g1357 i0 32.4 1.97025171624714 139 91 94.1 3 413 3 159 296 KAJ4459686.1 phosphatidylcholine transfer protein [Paratrimastix pyriformis] diamond 861 79 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;