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contig_metadata

9 rows where bioproject = "PRJNA1132896", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 9 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 9 ✖

bioproject 1

  • PRJNA1132896 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11762256 11762256 PRJNA1132896_P_NODE_7170_length_250_cov_0.870056_g7079_i0 PRJNA1132896 7170 250 0.870056 2.17514 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 154 5.269999999999999e-42   NR MCU0332065.1 2651163 g7079 i0 81.9 2.976 83 15 99.6 0 2 250 407 489 MCU0332065.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 744 154 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
14312560 14312560 PRJNA1132896_P_NODE_5552_length_267_cov_1.211340_g5461_i0 PRJNA1132896 5552 267 1.21134 3.2342778 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 195 3.84e-45   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g5461 i0 85.946 1.35205992509363 185 22 69 4 56 238 3705410 3705592 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 361 195 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
23235972 23235972 PRJNA1132896_P_NODE_7919_length_248_cov_0.880000_g7828_i0 PRJNA1132896 7919 248 0.88 2.1824 Ignavibacteria bacterium 2053306 Bacteria Bacteria 72 1.63e-12   NR HRB00589.1 2053306 g7828 i0 81 0.508064516129032 42 8 50.8 0 135 10 337 378 HRB00589.1 site-specific integrase [Ignavibacteria bacterium] diamond 126 72 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28681118 28681118 PRJNA1132896_P_NODE_4847_length_277_cov_1.495098_g4756_i0 PRJNA1132896 4847 277 1.495098 4.14142146 Ignavibacteria bacterium 2053306 Bacteria Bacteria 139 6.8e-37   NR HET56687.1 2053306 g4756 i0 81.8 0.833935018050541 77 14 83.4 0 231 1 54 130 HET56687.1 ABC transporter substrate-binding protein [Ignavibacteria bacterium] diamond 231 139 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29564970 29564970 PRJNA1132896_P_NODE_3810_length_292_cov_1.159817_g3719_i0 PRJNA1132896 3810 292 1.159817 3.38666564 Ignavibacterium sp. 2651167 Bacteria Bacteria 48.9 4.47e-4   NR MEJ5261861.1 2651167 g3719 i0 31.8 1.64383561643836 85 53 82.2 1 292 53 302 386 MEJ5261861.1 T9SS type A sorting domain-containing protein [Ignavibacterium sp.] diamond 480 48.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
30038732 30038732 PRJNA1132896_P_NODE_9071_length_244_cov_0.900585_g8980_i0 PRJNA1132896 9071 244 0.900585 2.1974274 Ignavibacteria bacterium 2053306 Bacteria Bacteria 155 2.59e-43   NR MBK8553051.1 2053306 g8980 i0 93.8 4.91803278688525 80 5 98.4 0 3 242 381 460 MBK8553051.1 hypothetical protein [Ignavibacteria bacterium] diamond 1200 155 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30607353 30607353 PRJNA1132896_P_NODE_7293_length_250_cov_0.870056_g7202_i0 PRJNA1132896 7293 250 0.870056 2.17514 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 118 8.87e-29   NR MCB0728760.1 2026749 g7202 i0 67.5 0.996 83 27 99.6 0 2 250 239 321 MCB0728760.1 hypothetical protein [Ignavibacteriota bacterium] diamond 249 118 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
31366112 31366112 PRJNA1132896_P_NODE_6076_length_259_cov_3.102151_g5985_i0 PRJNA1132896 6076 259 3.102151 8.03457109 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 82.4 1.45e-16   NR HSW53463.1 2651163 g5985 i0 46.8 0.891891891891892 77 39 86.9 1 258 34 208 284 HSW53463.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 231 82.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
32568337 32568337 PRJNA1132896_P_NODE_6559_length_253_cov_1.283333_g6468_i0 PRJNA1132896 6559 253 1.283333 3.24683249 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 60.5 2.5e-8   NR MFH1206129.1 2026749 g6468 i0 56.9 1.90909090909091 51 22 60.5 0 153 1 1001 1051 MFH1206129.1 SdrD B-like domain-containing protein [Ignavibacteriota bacterium] diamond 483 60.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;