RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA1132896", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 6 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 6 ✖

bioproject 1

  • PRJNA1132896 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28333612 28333612 PRJNA1132896_P_NODE_9546_length_243_cov_0.905882_g9455_i0 PRJNA1132896 9546 243 0.905882 2.20129326 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 52.8 4.89e-6   NR MBL8086383.1 2711154 g9455 i0 43 0.975308641975309 79 37 97.5 1 1 237 65 135 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 237 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
28396773 28396773 PRJNA1132896_P_NODE_4306_length_284_cov_2.715640_g4215_i0 PRJNA1132896 4306 284 2.71564 7.7124176 Candidatus Obscuribacter phosphatis 1906157 Bacteria Bacteria 61.2 1.9e-8   NR MBN8662132.1 1906157 g4215 i0 36.5 1.01408450704225 96 56 97.2 3 283 8 437 531 MBN8662132.1 TerD family protein [Candidatus Obscuribacter phosphatis] diamond 288 61.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter phosphatis
28775600 28775600 PRJNA1132896_P_NODE_9987_length_242_cov_0.911243_g9896_i0 PRJNA1132896 9987 242 0.911243 2.20520806 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 155 1.14e-41   NR MDR3615325.1 2364082 g9896 i0 90 0.991735537190083 80 8 99.2 0 1 240 759 838 MDR3615325.1 TonB-dependent receptor [Candidatus Obscuribacterales bacterium] diamond 240 155 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29912570 29912570 PRJNA1132896_P_NODE_8211_length_247_cov_0.885057_g8120_i0 PRJNA1132896 8211 247 0.885057 2.18609079 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 153 8.02e-45   NR MDR3613645.1 2364082 g8120 i0 79 0.983805668016194 81 17 98.4 0 4 246 119 199 MDR3613645.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 243 153 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30691243 30691243 PRJNA1132896_P_NODE_5053_length_274_cov_1.353234_g4962_i0 PRJNA1132896 5053 274 1.353234 3.70786116 Bacillati 1783272 Bacteria Bacteria 157 3.65e-43   NR MBK9143677.1 2052166 g4962 i0 85.7 4.98175182481752 91 13 99.6 0 274 2 352 442 MBK9143677.1 arginine--tRNA ligase [Candidatus Melainabacteria bacterium] diamond 1365 157 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
32599653 32599653 PRJNA1132896_P_NODE_10080_length_241_cov_1.565476_g9989_i0 PRJNA1132896 10080 241 1.565476 3.77279716 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 83.6 6.95e-18   NR MBL8086383.1 2711154 g9989 i0 74.1 0.672199170124481 54 13 66 1 160 2 90 143 MBL8086383.1 ankyrin repeat domain-containing protein [Candidatus Obscuribacter sp.] diamond 162 83.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;