RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1132896", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Moraniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Moraniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1132896 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29933229 29933229 PRJNA1132896_P_NODE_6891_length_251_cov_0.865169_g6800_i0 PRJNA1132896 6891 251 0.865169 2.17157419 Pseudomonadati 3379134 Bacteria Bacteria 46.2 0.00254   NR KKP57708.1 1618715 g6800 i0 41.8 4.74501992031873 55 30 63.3 1 3 161 390 444 KKP57708.1 MAG: hypothetical protein UR51_C0012G0005 [Candidatus Moranbacteria bacterium GW2011_GWF1_34_10] diamond 1191 46.6 0.991416309012876 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moranbacteria bacterium GW2011_GWF1_34_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;