RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1132896", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA1132896 · 4 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21960386 21960386 PRJNA1132896_P_NODE_2598_length_342_cov_2.431227_g2507_i0 PRJNA1132896 2598 342 2.431227 8.31479634 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 161 4.2099999999999996e-47   NR XP_013754328.1 461836 g2507 i0 70.8 7.92982456140351 113 33 99.1 0 2 340 49 161 XP_013754328.1 60S ribosomal protein L7 [Thecamonas trahens ATCC 50062] diamond 2712 161 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
25258101 25258101 PRJNA1132896_P_NODE_920_length_538_cov_1.675269_g829_i0 PRJNA1132896 920 538 1.675269 9.01294722 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 247 1.39e-78   NR XP_013760592.1 461836 g829 i0 69.5 0.986988847583643 177 51 98.7 1 534 4 82 255 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 531 247 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30418253 30418253 PRJNA1132896_P_NODE_4573_length_281_cov_1.346154_g4482_i0 PRJNA1132896 4573 281 1.346154 3.78269274 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.5 4.3e-17   NR XP_013762426.1 461836 g4482 i0 63.2 0.725978647686833 68 25 72.6 0 1 204 158 225 XP_013762426.1 uncharacterized protein AMSG_00696 [Thecamonas trahens ATCC 50062] diamond 204 85.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31461040 31461040 PRJNA1132896_P_NODE_2436_length_352_cov_1.448029_g2345_i0 PRJNA1132896 2436 352 1.448029 5.09706208 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 102 2.2400000000000002e-22   NR XP_013761525.1 461836 g2345 i0 51.3 3 117 53 99.7 1 352 2 487 599 XP_013761525.1 phytoene desaturase [Thecamonas trahens ATCC 50062] diamond 1056 102 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;