contig_metadata
17 rows where bioproject = "PRJNA1129273", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283263 | 283263 | PRJNA1129273_P_NODE_5481_length_302_cov_1.659389_g5201_i0 | PRJNA1129273 | 5481 | 302 | 1.659389 | 5.01135478 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 230 | 1.2099999999999995e-55 | NTclustered | gi|2621704107|emb|OY761556.1| | 1978231 | g5201 | i0 | 80.528 | 149.937086092715 | 303 | 55 | 99 | 4 | 1 | 301 | 804998 | 804698 | MAG: Acidobacteriota bacterium isolate 5ca539cc-3996-4499-a76f-7ad0c810d377 genome assembly, chromosome: 1 | blastn | 45281 | 230 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 4110267 | 4110267 | PRJNA1129273_P_NODE_4784_length_326_cov_1.434783_g4504_i0 | PRJNA1129273 | 4784 | 326 | 1.434783 | 4.67739258 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 340 | 5.839999999999999e-89 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g4504 | i0 | 85.583 | 106.634969325153 | 326 | 46 | 99 | 1 | 1 | 325 | 3298176 | 3298501 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 34763 | 340 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 5386438 | 5386438 | PRJNA1129273_P_NODE_11425_length_202_cov_6.178295_g11145_i0 | PRJNA1129273 | 11425 | 202 | 6.178295 | 12.4801559 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 320 | 4.37e-83 | NTclustered | gi|2874253826|emb|OY969810.1| | 2026791 | g11145 | i0 | 95.122 | 198.336633663366 | 205 | 6 | 99 | 2 | 2 | 202 | 6659462 | 6659258 | MAG: Bryobacterales bacterium isolate MFD04967.bin.c.1 genome assembly, chromosome: 1 | blastn | 40064 | 320 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 5386459 | 5386459 | PRJNA1129273_P_NODE_5625_length_298_cov_1.342222_g5345_i0 | PRJNA1129273 | 5625 | 298 | 1.342222 | 3.99982156 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 357 | 5.24e-94 | NTclustered | gi|76574297|gb|DQ139445.1| | 171953 | g5345 | i0 | 88.514 | 204.070469798658 | 296 | 33 | 99 | 1 | 1 | 295 | 74 | 369 | Uncultured Acidobacteria bacterium clone CAL4 23S ribosomal RNA gene, partial sequence | blastn | 60813 | 357 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 6661139 | 6661139 | PRJNA1129273_P_NODE_6886_length_274_cov_1.611940_g6606_i0 | PRJNA1129273 | 6886 | 274 | 1.61194 | 4.4167156 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 448 | 2.7499999999999993e-121 | NTclustered | gi|2874253826|emb|OY969810.1| | 2026791 | g6606 | i0 | 96.337 | 559.956204379562 | 273 | 9 | 99 | 1 | 2 | 274 | 6658160 | 6658431 | MAG: Bryobacterales bacterium isolate MFD04967.bin.c.1 genome assembly, chromosome: 1 | blastn | 153428 | 448 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 7936309 | 7936309 | PRJNA1129273_P_NODE_6967_length_273_cov_1.515000_g6687_i0 | PRJNA1129273 | 6967 | 273 | 1.515 | 4.13595 | Occallatibacter riparius | 1002689 | Bacteria | Bacteria | 496 | 9.63e-136 | NTclustered | gi|2304899767|gb|CP093313.1| | 1002689 | g6687 | i0 | 99.631 | 113.78021978022 | 271 | 1 | 99 | 0 | 2 | 272 | 6620010 | 6619740 | Occallatibacter riparius strain DSM 25168 chromosome, complete genome | blastn | 31062 | 496 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Occallatibacter | Occallatibacter riparius | ||
| 7936316 | 7936316 | PRJNA1129273_P_NODE_7867_length_260_cov_1.663102_g7587_i0 | PRJNA1129273 | 7867 | 260 | 1.663102 | 4.3240652 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 412 | 9.43e-111 | NTclustered | gi|112980849|gb|DQ829653.1| | 171953 | g7587 | i0 | 95.367 | 178.603846153846 | 259 | 12 | 99 | 0 | 2 | 260 | 930 | 1188 | Uncultured Acidobacteria bacterium clone DON8 23S ribosomal RNA gene, partial sequence | blastn | 46437 | 412 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 9211248 | 9211248 | PRJNA1129273_P_NODE_3128_length_421_cov_1.537356_g2849_i0 | PRJNA1129273 | 3128 | 421 | 1.537356 | 6.47226876 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|2874253852|emb|OY969908.1| | 194844 | g2849 | i0 | 99.762 | 102.70783847981 | 421 | 1 | 100 | 0 | 1 | 421 | 2169933 | 2170353 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD09286.bin.1.44 genome assembly, chromosome: 1 | blastn | 43240 | 773 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 10486803 | 10486803 | PRJNA1129273_P_NODE_9169_length_248_cov_3.514286_g8889_i0 | PRJNA1129273 | 9169 | 248 | 3.514286 | 8.71542928 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 357 | 4.24e-94 | NTclustered | gi|2874254061|emb|OY970385.1| | 2026791 | g8889 | i0 | 92.8 | 167.459677419355 | 250 | 12 | 99 | 5 | 1 | 245 | 2776947 | 2777195 | MAG: Bryobacterales bacterium isolate MFD03726.bin.c.1 genome assembly, chromosome: 1 | blastn | 41530 | 357 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 15586170 | 15586170 | PRJNA1129273_P_NODE_1733_length_616_cov_2.926335_g1465_i0 | PRJNA1129273 | 1733 | 616 | 2.926335 | 18.0262236 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 961 | 0 | NTclustered | gi|2874253796|emb|OY969780.1| | 194844 | g1465 | i0 | 95.372 | 100.909090909091 | 605 | 27 | 98 | 1 | 7 | 610 | 284685 | 285289 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 | blastn | 62160 | 961 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 16860452 | 16860452 | PRJNA1129273_P_NODE_6574_length_279_cov_1.490291_g6294_i0 | PRJNA1129273 | 6574 | 279 | 1.490291 | 4.15791189 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 344 | 3.79e-90 | NTclustered | gi|2874253677|emb|OY969111.1| | 171953 | g6294 | i0 | 89.085 | 650.412186379928 | 284 | 21 | 99 | 8 | 2 | 278 | 715754 | 716034 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 | blastn | 181465 | 344 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 18135020 | 18135020 | PRJNA1129273_P_NODE_5335_length_306_cov_4.167382_g5055_i0 | PRJNA1129273 | 5335 | 306 | 4.167382 | 12.75218892 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 401 | 2.4599999999999992e-107 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g5055 | i0 | 90.461 | 200.441176470588 | 304 | 29 | 99 | 0 | 2 | 305 | 3559017 | 3559320 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 61335 | 401 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 21960017 | 21960017 | PRJNA1129273_P_NODE_1298_length_740_cov_2.818591_g1046_i0 | PRJNA1129273 | 1298 | 740 | 2.818591 | 20.8575734 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 815 | 0 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g1046 | i0 | 86.898 | 70.2162162162162 | 748 | 72 | 99 | 20 | 1 | 739 | 3558226 | 3557496 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 51960 | 815 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 26627143 | 26627143 | PRJNA1129273_P_NODE_9821_length_245_cov_1.726744_g9541_i0 | PRJNA1129273 | 9821 | 245 | 1.726744 | 4.2305228 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 60.8 | 1.34e-8 | NR | MBK8197439.1 | 1978231 | g9541 | i0 | 53.7 | 1.18775510204082 | 54 | 25 | 66.1 | 0 | 164 | 3 | 30 | 83 | MBK8197439.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 291 | 60.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27659836 | 27659836 | PRJNA1129273_P_NODE_4744_length_327_cov_2.370079_g4464_i0 | PRJNA1129273 | 4744 | 327 | 2.370079 | 7.75015833 | Acidobacteriota | 57723 | Bacteria | Bacteria | 134 | 3.85e-36 | NR | HUH63403.1 | 1964191 | g4464 | i0 | 63.9 | 10.7155963302752 | 108 | 39 | 99.1 | 0 | 3 | 326 | 169 | 276 | HUH63403.1 aldolase/citrate lyase family protein [Terracidiphilus sp.] | diamond | 3504 | 134 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terracidiphilus | Terracidiphilus sp. | ||
| 29533459 | 29533459 | PRJNA1129273_P_NODE_4950_length_320_cov_3.040486_g4670_i0 | PRJNA1129273 | 4950 | 320 | 3.040486 | 9.7295552 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 84.3 | 2.21e-16 | NR | MDR3736461.1 | 2052142 | g4670 | i0 | 74.5 | 0.478125 | 51 | 13 | 47.8 | 0 | 319 | 167 | 89 | 139 | MDR3736461.1 chaperonin GroEL [Acidobacteriaceae bacterium] | diamond | 153 | 84.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium | |||
| 32788345 | 32788345 | PRJNA1129273_P_NODE_10960_length_232_cov_3.094340_g10680_i0 | PRJNA1129273 | 10960 | 232 | 3.09434 | 7.1788688 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 43.1 | 0.0215 | NR | MBV6495434.1 | 2283092 | g10680 | i0 | 33.9 | 0.724137931034483 | 56 | 31 | 72.4 | 1 | 10 | 177 | 199 | 248 | MBV6495434.1 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD [Pyrinomonadaceae bacterium] | diamond | 168 | 43.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;