RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1129273", tax_kingdom = "Metazoa" and tax_phylum = "Placozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1129273 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9959785 9959785 PRJNA1129273_P_NODE_6768_length_276_cov_1.522167_g6488_i0 PRJNA1129273 6768 276 1.522167 4.20118092 Metazoa 33208 Placozoa other_Eukaryota 136 9.78e-36   NR XP_002109666.1 10228 g6488 i0 73.3 10.2826086956522 86 23 93.5 0 275 18 363 448 XP_002109666.1 uncharacterized protein TRIADDRAFT_37272 [Trichoplax adhaerens] diamond 2838 136 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
31650371 31650371 PRJNA1129273_P_NODE_6697_length_277_cov_1.514706_g6417_i0 PRJNA1129273 6697 277 1.514706 4.19573562 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 61.2 1.23e-9   NR XP_002109835.1 10228 g6417 i0 51.5 1.47292418772563 66 32 71.5 0 225 28 2 67 XP_002109835.1 expressed hypothetical protein [Trichoplax adhaerens] diamond 408 61.2 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;