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contig_metadata

12 rows where bioproject = "PRJNA1129273", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 12 ✖

tax_kingdom 1

  • Metazoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1129273 · 12 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6661107 6661107 PRJNA1129273_P_NODE_2666_length_467_cov_4.428934_g2390_i0 PRJNA1129273 2666 467 4.428934 20.68312178 Metazoa 33208 Nematoda Nematoda 214 1.89e-65   NR KRY41729.1 6334 g2390 i0 67.8 11.4603854389722 149 48 95.7 0 21 467 226 374 KRY41729.1 60S ribosomal protein L27a [Trichinella spiralis] diamond 5352 216 0.990740740740741 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
15586184 15586184 PRJNA1129273_P_NODE_4733_length_328_cov_0.905882_g4453_i0 PRJNA1129273 4733 328 0.905882 2.97129296 Toxocara canis 6265 Nematoda Nematoda 155 3.76e-43   NR VDM39791.1 6265 g4453 i0 83.5 1.66463414634146 91 14 83.2 1 326 54 339 428 VDM39791.1 unnamed protein product [Toxocara canis] diamond 546 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
19409130 19409130 PRJNA1129273_P_NODE_3256_length_410_cov_1.160237_g2977_i0 PRJNA1129273 3256 410 1.160237 4.7569717 Dictyocaulus viviparus 29172 Nematoda Nematoda 200 8.76e-59   NR KJH45969.1 29172 g2977 i0 67.4 5.8609756097561 135 44 98.8 0 4 408 113 247 KJH45969.1 putative histidine--tRNA ligase [Dictyocaulus viviparus] diamond 2403 200 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
27217193 27217193 PRJNA1129273_P_NODE_3622_length_384_cov_4.678457_g3342_i0 PRJNA1129273 3622 384 4.678457 17.96527488 Rhabditida 6236 Nematoda Nematoda 134 4.95e-38   NR CAD5208042.1 6326 g3342 i0 69.2 3.5546875 91 28 71.1 0 331 59 1 91 CAD5208042.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1365 134 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
27438927 27438927 PRJNA1129273_P_NODE_7503_length_265_cov_1.812500_g7223_i0 PRJNA1129273 7503 265 1.8125 4.803125 Caenorhabditis 6237 Nematoda Nematoda 95.1 9.84e-24   NR NP_001379573.1 6239 g7223 i0 73.6 4.17735849056604 53 14 60 0 213 55 3 55 NP_001379573.1 Small ribosomal subunit protein uS14 [Caenorhabditis elegans] diamond 1107 95.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
28354251 28354251 PRJNA1129273_P_NODE_6866_length_274_cov_4.970149_g6586_i0 PRJNA1129273 6866 274 4.970149 13.61820826 Opisthokonta 33154 Nematoda Nematoda 122 8.35e-34   NR KAF8363112.1 54126 g6586 i0 69 5.44160583941606 84 25 92 1 20 271 19 101 KAF8363112.1 hypothetical protein PRIPAC_90035 [Pristionchus pacificus] diamond 1491 123 0.991869918699187 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
28933588 28933588 PRJNA1129273_P_NODE_3208_length_414_cov_2.390029_g2929_i0 PRJNA1129273 3208 414 2.390029 9.89472006 Pristionchus fissidentatus 1538716 Nematoda Nematoda 89 1.04e-19   NR GMT18625.1 1538716 g2929 i0 40.5 1.88405797101449 131 71 94.2 3 2 391 2 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 780 89 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
29123279 29123279 PRJNA1129273_P_NODE_1609_length_643_cov_2.238596_g1344_i0 PRJNA1129273 1609 643 2.238596 14.39417228 Ancylostoma duodenale 51022 Nematoda Nematoda 173 3.02e-50   NR KIH46789.1 51022 g1344 i0 47.8 11.3561430793157 182 82 84 4 548 9 33 203 KIH46789.1 papain family cysteine protease [Ancylostoma duodenale] diamond 7302 173 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
29975546 29975546 PRJNA1129273_P_NODE_1931_length_578_cov_1.584158_g1660_i0 PRJNA1129273 1931 578 1.584158 9.15643324 Meloidogyne enterolobii 390850 Nematoda Nematoda 46.6 0.0349   NR CAK5069761.1 390850 g1660 i0 33 0.975778546712803 94 57 48.3 3 145 423 728 816 CAK5069761.1 unnamed protein product [Meloidogyne enterolobii] diamond 564 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
30659705 30659705 PRJNA1129273_P_NODE_8453_length_252_cov_2.273743_g8173_i0 PRJNA1129273 8453 252 2.273743 5.72983236 Metazoa 33208 Nematoda Nematoda 59.7 4.35e-8   NR EFP12493.1 31234 g8173 i0 43.8 9.59523809523809 80 38 86.9 1 3 221 296 375 EFP12493.1 CRE-PAB-1 protein [Caenorhabditis remanei] diamond 2418 59.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
31544898 31544898 PRJNA1129273_P_NODE_6096_length_287_cov_1.429907_g5816_i0 PRJNA1129273 6096 287 1.429907 4.10383309 Rhabditidae 6243 Nematoda Nematoda 67 1.73e-10   NR CAJ0947582.1 2138241 g5816 i0 43.6 3.97212543554007 94 51 96.2 1 278 3 46 139 CAJ0947582.1 unnamed protein product, partial [Mesorhabditis belari] diamond 1140 67 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
31618920 31618920 PRJNA1129273_P_NODE_9616_length_246_cov_1.757225_g9336_i0 PRJNA1129273 9616 246 1.757225 4.3227735 Parelaphostrongylus tenuis 148309 Nematoda Nematoda 43.9 0.0147   NR KAJ1360850.1 148309 g9336 i0 48.9 2.4390243902439 47 24 57.3 0 244 104 235 281 KAJ1360850.1 Rio2, N-terminal [Parelaphostrongylus tenuis] diamond 600 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;