RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1129273", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1129273 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14312174 14312174 PRJNA1129273_P_NODE_10092_length_244_cov_0.906433_g9812_i0 PRJNA1129273 10092 244 0.906433 2.21169652 root 1 Root_unresolved Root_unresolved 124 1.9e-32   NR KAK2148578.1 53620 g9812 i0 73.8 9.73770491803279 80 21 98.4 0 4 243 78 157 KAK2148578.1 hypothetical protein LSH36_491g04001 [Paralvinella palmiformis] diamond 2376 125 0.992 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
25257988 25257988 PRJNA1129273_P_NODE_4720_length_328_cov_1.807843_g4440_i0 PRJNA1129273 4720 328 1.807843 5.92972504 Capitella teleta 283909 Annelida Annelida 114 1.83e-27   NR ELU09340.1 283909 g4440 i0 56.8 2.57926829268293 95 40 86.9 1 39 323 161 254 ELU09340.1 hypothetical protein CAPTEDRAFT_174065 [Capitella teleta] diamond 846 114 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;