contig_metadata
3 rows where bioproject = "PRJNA1129273", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27375835 | 27375835 | PRJNA1129273_P_NODE_9083_length_249_cov_0.880682_g8803_i0 | PRJNA1129273 | 9083 | 249 | 0.880682 | 2.19289818 | Perkinsus | 28000 | SAR_Eukaryotes | SAR_Eukaryotes | 78.6 | 9.87e-15 | NR | KAF4724606.1 | 32597 | g8803 | i0 | 58.3 | 1.73493975903614 | 72 | 29 | 86.7 | 1 | 33 | 248 | 22 | 92 | KAF4724606.1 hypothetical protein FOZ63_020143 [Perkinsus olseni] | diamond | 432 | 78.6 | 1 | Eukaryota | Sar | Perkinsozoa | Perkinsida | Perkinsidae | Perkinsus | Perkinsus olseni | |||
| 30860237 | 30860237 | PRJNA1129273_P_NODE_5374_length_305_cov_2.400862_g5094_i0 | PRJNA1129273 | 5374 | 305 | 2.400862 | 7.3226291 | Perkinsus marinus ATCC 5 | 31276 | SAR_Eukaryotes | SAR_Eukaryotes | 58.2 | 2.66e-7 | NR | XP_002773799.1 | 423536 | g5094 | i0 | 35.6 | 5.00655737704918 | 87 | 56 | 85.6 | 0 | 262 | 2 | 114 | 200 | XP_002773799.1 cathepsin L, putative [Perkinsus marinus ATCC 50983] | diamond | 1527 | 58.2 | 1 | Eukaryota | Sar | Perkinsozoa | Perkinsida | Perkinsidae | Perkinsus | Perkinsus marinus | |||
| 31429112 | 31429112 | PRJNA1129273_P_NODE_4016_length_359_cov_1.615385_g3736_i0 | PRJNA1129273 | 4016 | 359 | 1.615385 | 5.79923215 | Perkinsus olseni | 32597 | SAR_Eukaryotes | SAR_Eukaryotes | 70.5 | 2.5e-11 | NR | KAF4683311.1 | 32597 | g3736 | i0 | 68.2 | 1.1866295264624 | 44 | 14 | 36.8 | 0 | 11 | 142 | 343 | 386 | KAF4683311.1 mRNA-binding ribosome synthesis protein [Perkinsus olseni] | diamond | 426 | 70.5 | 1 | Eukaryota | Sar | Perkinsozoa | Perkinsida | Perkinsidae | Perkinsus | Perkinsus olseni |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;