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contig_metadata

22 rows where bioproject = "PRJNA1129273", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 22 ✖

tax_clade 1

  • Sar · 22 ✖

bioproject 1

  • PRJNA1129273 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1557845 1557845 PRJNA1129273_P_NODE_5062_length_316_cov_0.950617_g4782_i0 PRJNA1129273 5062 316 0.950617 3.00394972 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 157 7.169999999999998e-43   NR RLN58565.1 325452 g4782 i0 71.3 39.3417721518987 101 29 95.9 0 10 312 286 386 RLN58565.1 hypothetical protein BBP00_00006943 [Phytophthora kernoviae] diamond 12432 157 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
4110305 4110305 PRJNA1129273_P_NODE_9004_length_249_cov_1.710227_g8724_i0 PRJNA1129273 9004 249 1.710227 4.25846523 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 9.799999999999999e-35   NR DBA04472.1 4803 g8724 i0 72 20.7228915662651 82 23 98.8 0 4 249 606 687 DBA04472.1 TPA: hypothetical protein N0F65_010068 [Lagenidium giganteum] diamond 5160 135 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
6661165 6661165 PRJNA1129273_P_NODE_9486_length_247_cov_0.890805_g9206_i0 PRJNA1129273 9486 247 0.890805 2.20028835 root 1 Root_unresolved Root_unresolved 116 1.22e-31   NR KAE9065155.1 53985 g9206 i0 81.8 2.84210526315789 77 14 93.5 0 232 2 30 106 KAE9065155.1 hypothetical protein PF010_g28318, partial [Phytophthora fragariae] diamond 702 116 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
7409587 7409587 PRJNA1129273_P_NODE_8106_length_257_cov_1.771739_g7826_i0 PRJNA1129273 8106 257 1.771739 4.55336923 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 100 1.46e-22   NR XP_009520350.1 67593 g7826 i0 60 4.70428015564202 85 32 99.2 1 256 2 5 87 XP_009520350.1 hypothetical protein PHYSODRAFT_344860 [Phytophthora sojae] diamond 1209 100 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
17609354 17609354 PRJNA1129273_P_NODE_8894_length_250_cov_0.870056_g8614_i0 PRJNA1129273 8894 250 0.870056 2.17514 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 459 1.1399999999999998e-124   NTclustered gi|33520246|gb|AY273991.1| 4787 g8614 i0 100 99.208 248 0 99 0 2 249 411 164 Phytophthora infestans large subunit ribosomal RNA gene, partial sequence blastn 24802 459 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
21960025 21960025 PRJNA1129273_P_NODE_3158_length_418_cov_2.866667_g2879_i0 PRJNA1129273 3158 418 2.866667 11.98266806 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 153 5.08e-45   NR OQR94730.1 74557 g2879 i0 65.7 171.574162679426 140 36 99.8 3 2 418 1 129 OQR94730.1 hypothetical protein THRCLA_22217 [Thraustotheca clavata] diamond 71718 154 0.993506493506494 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
26616168 26616168 PRJNA1129273_P_NODE_3781_length_374_cov_1.784053_g3501_i0 PRJNA1129273 3781 374 1.7840530000000001 6.67235822 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 204 1.09e-62   NR XP_067822870.1 4779 g3501 i0 84 241.163101604278 106 17 85 0 3 320 210 315 XP_067822870.1 uncharacterized protein CCR75_007277 [Bremia lactucae] diamond 90195 206 0.990291262135922 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
26943676 26943676 PRJNA1129273_P_NODE_3802_length_373_cov_1.713333_g3522_i0 PRJNA1129273 3802 373 1.713333 6.39073209 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 60.8 7.3900000000000007e-08   NR KUF84593.1 4792 g3522 i0 31.4 2.7828418230563 105 59 74 1 329 54 372 476 KUF84593.1 Ubiquitin and WLM domain-containing protein [Phytophthora nicotianae] diamond 1038 60.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
27006912 27006912 PRJNA1129273_P_NODE_2842_length_448_cov_1.682667_g2563_i0 PRJNA1129273 2842 448 1.682667 7.53834816 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 50.4 4.73e-4   NR KAG9408400.1 112091 g2563 i0 41.5 0.435267857142857 65 34 41.5 2 227 42 86 149 KAG9408400.1 hypothetical protein AC1031_021638 [Aphanomyces cochlioides] diamond 195 50.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
28049451 28049451 PRJNA1129273_P_NODE_1865_length_590_cov_2.553191_g1595_i0 PRJNA1129273 1865 590 2.553191 15.0638269 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 162 2.4899999999999996e-47   NR KAE8911393.1 53985 g1595 i0 57 1.67796610169492 165 50 83.9 3 50 544 1 144 KAE8911393.1 hypothetical protein PF003_g4481 [Phytophthora fragariae] diamond 990 162 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
28543984 28543984 PRJNA1129273_P_NODE_5767_length_293_cov_3.104545_g5487_i0 PRJNA1129273 5767 293 3.104545 9.09631685 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 113 3.77e-28   NR KAH9103988.1 100861 g5487 i0 64 3.67576791808874 89 29 88.1 1 258 1 29 117 KAH9103988.1 hypothetical protein LEN26_015148 [Aphanomyces euteiches] diamond 1077 114 0.991228070175439 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29017708 29017708 PRJNA1129273_P_NODE_4068_length_357_cov_1.838028_g3788_i0 PRJNA1129273 4068 357 1.838028 6.56175996 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 1.2500000000000001e-22   NR XP_067782380.1 4785 g3788 i0 44.2 11.2268907563025 113 60 94.1 3 340 5 75 185 XP_067782380.1 CMGC/MAPK protein Kinase [Phytophthora cinnamomi] diamond 4008 102 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
29269756 29269756 PRJNA1129273_P_NODE_6469_length_281_cov_1.110577_g6189_i0 PRJNA1129273 6469 281 1.110577 3.12072137 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 77 5.32e-14   NR KAJ8576524.1 4785 g6189 i0 44.3 6.14946619217082 88 49 94 0 13 276 899 986 KAJ8576524.1 hypothetical protein ON010_g2687 [Phytophthora cinnamomi] diamond 1728 77 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
29533460 29533460 PRJNA1129273_P_NODE_5710_length_295_cov_3.945946_g5430_i0 PRJNA1129273 5710 295 3.945946 11.6405407 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 91.7 6.78e-20   NR KAF1783772.1 29920 g5430 i0 56.5 1.40338983050847 69 30 70.2 0 87 293 177 245 KAF1783772.1 Ribosomal protein L35Ae, conserved site [Phytophthora cactorum] diamond 414 91.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
29585351 29585351 PRJNA1129273_P_NODE_8130_length_257_cov_1.467391_g7850_i0 PRJNA1129273 8130 257 1.467391 3.77119487 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 104 2.9499999999999994e-24   NR KAK1941687.1 4793 g7850 i0 57 42.0350194552529 79 34 92.2 0 257 21 169 247 KAK1941687.1 Alpha-centractin [Phytophthora citrophthora] diamond 10803 105 0.990476190476191 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
29817440 29817440 PRJNA1129273_P_NODE_1351_length_723_cov_3.300000_g1096_i0 PRJNA1129273 1351 723 3.3 23.859 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 137 6.64e-35   NR OQS00341.1 74557 g1096 i0 40.4 2.35269709543568 183 107 75.5 2 715 170 66 247 OQS00341.1 hypothetical protein THRCLA_06000 [Thraustotheca clavata] diamond 1701 137 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30260161 30260161 PRJNA1129273_P_NODE_1032_length_853_cov_2.515385_g806_i0 PRJNA1129273 1032 853 2.515385 21.45623405 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 58.9 1.23e-5   NR XP_012197413.1 695850 g806 i0 51 0.555685814771395 51 25 17.9 0 3 155 1197 1247 XP_012197413.1 hypothetical protein SPRG_19488 [Saprolegnia parasitica CBS 223.65] diamond 474 58.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
30860236 30860236 PRJNA1129273_P_NODE_4054_length_357_cov_7.633803_g3774_i0 PRJNA1129273 4054 357 7.633803 27.25267671 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 70.5 1.89e-12   NR KAF0732248.1 100861 g3774 i0 46.6 4.38655462184874 103 52 86.6 2 311 3 16 115 KAF0732248.1 hypothetical protein Ae201684_010540 [Aphanomyces euteiches] diamond 1566 70.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31713834 31713834 PRJNA1129273_P_NODE_3437_length_395_cov_3.922360_g3157_i0 PRJNA1129273 3437 395 3.92236 15.493322 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.38e-4   NR KAG9412244.1 112091 g3157 i0 34.6 0.615189873417721 81 50 61.5 2 85 327 110 187 KAG9412244.1 hypothetical protein AC1031_015185 [Aphanomyces cochlioides] diamond 243 51.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
32209154 32209154 PRJNA1129273_P_NODE_11158_length_227_cov_2.019481_g10878_i0 PRJNA1129273 11158 227 2.019481 4.58422187 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 54.3 2.51e-6   NR DBA04150.1 4803 g10878 i0 56.1 5.93392070484582 41 17 54.2 1 102 224 404 443 DBA04150.1 TPA: hypothetical protein N0F65_004258 [Lagenidium giganteum] diamond 1347 54.7 0.992687385740402 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32283603 32283603 PRJNA1129273_P_NODE_6959_length_273_cov_1.535000_g6679_i0 PRJNA1129273 6959 273 1.535 4.19055 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 67.4 9.12e-11   NR RHY27603.1 157072 g6679 i0 40.9 0.967032967032967 88 49 93.4 2 268 14 42 129 RHY27603.1 hypothetical protein DYB32_007655 [Aphanomyces invadans] diamond 264 67.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
32462351 32462351 PRJNA1129273_P_NODE_6099_length_287_cov_1.411215_g5819_i0 PRJNA1129273 6099 287 1.411215 4.05018705 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.11e-13   NR POM79695.1 4796 g5819 i0 49.4 5.86411149825784 77 37 78.4 1 22 246 180 256 POM79695.1 Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit, partial [Phytophthora palmivora] diamond 1683 74.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;