contig_metadata
19 rows where bioproject = "PRJNA1129273" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2833901 | 2833901 | PRJNA1129273_P_NODE_10603_length_242_cov_0.911243_g10323_i0 | PRJNA1129273 | 10603 | 242 | 0.911243 | 2.20520806 | Phormidium nigroviride | 482564 | Bacteria | Bacteria | 405 | 1.45e-108 | NTclustered | gi|428238862|gb|CP003614.1| | 179408 | g10323 | i0 | 97.083 | 4.55785123966942 | 240 | 7 | 99 | 0 | 2 | 241 | 4398135 | 4398374 | Oscillatoria nigro-viridis PCC 7112 chromosome, complete genome | blastn | 1103 | 405 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Phormidium | Phormidium nigroviride | |
| 3582167 | 3582167 | PRJNA1129273_P_NODE_10023_length_244_cov_1.807018_g9743_i0 | PRJNA1129273 | 10023 | 244 | 1.807018 | 4.40912392 | Nostoc | 1177 | Bacteria | Bacteria | 350 | 6.969999999999998e-92 | NTclustered | gi|1468713264|gb|CP031941.1| | 446679 | g9743 | i0 | 92.623 | 2.99590163934426 | 244 | 17 | 99 | 1 | 2 | 244 | 5889113 | 5888870 | Nostoc sphaeroides strain Kutzing En chromosome, complete genome | blastn | 731 | 350 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sphaeroides | |
| 5386420 | 5386420 | PRJNA1129273_P_NODE_10005_length_244_cov_2.374269_g9725_i0 | PRJNA1129273 | 10005 | 244 | 2.374269 | 5.79321636 | Microcoleus anatoxicus | 2705319 | Bacteria | Bacteria | 387 | 5.31e-103 | NTclustered | gi|2812421464|gb|CP120853.1| | 2705319 | g9725 | i0 | 95.455 | 6.19672131147541 | 242 | 11 | 99 | 0 | 2 | 243 | 6206586 | 6206827 | MAG: Microcoleus anatoxicus isolate Neu2020_A chromosome, complete genome | blastn | 1512 | 387 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus anatoxicus | |
| 6661134 | 6661134 | PRJNA1129273_P_NODE_646_length_1101_cov_10.027237_g194_i1 | PRJNA1129273 | 646 | 1101 | 10.027237 | 110.39987937 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 1592 | 0 | NTclustered | gi|225696258|gb|FJ805925.1| | 259957 | g194 | i1 | 92.831 | 106.465031789282 | 1102 | 74 | 99 | 4 | 2 | 1100 | 1633 | 2732 | Uncultured Chroococcidiopsis sp. clone AS3_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 117218 | 1592 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 7409576 | 7409576 | PRJNA1129273_P_NODE_5386_length_305_cov_1.517241_g5106_i0 | PRJNA1129273 | 5386 | 305 | 1.517241 | 4.62758505 | Microcystis | 1125 | Bacteria | Bacteria | 211 | 4.43e-50 | NTclustered | gi|1861038541|dbj|LC557454.1| | 1126 | g5106 | i0 | 79.672 | 135.714754098361 | 305 | 53 | 100 | 6 | 1 | 305 | 691 | 986 | Microcystis aeruginosa NIES-1062 gene for 23S rRNA, partial sequence | blastn | 41393 | 211 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis aeruginosa | |
| 8684746 | 8684746 | PRJNA1129273_P_NODE_3527_length_390_cov_2.274448_g3247_i0 | PRJNA1129273 | 3527 | 390 | 2.274448 | 8.8703472 | Hassallia | 482629 | Bacteria | Bacteria | 617 | 2.9299999999999997e-172 | NTclustered | gi|1519336825|gb|MK211226.1| | 2489140 | g3247 | i0 | 95.361 | 307.569230769231 | 388 | 18 | 99 | 0 | 2 | 389 | 2356 | 1969 | Hassallia byssoidea KZ-2-2-3 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence | blastn | 119952 | 617 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Tolypothrichaceae | Hassallia | Hassallia byssoidea | |
| 11761895 | 11761895 | PRJNA1129273_P_NODE_8370_length_253_cov_2.627778_g8090_i0 | PRJNA1129273 | 8370 | 253 | 2.627778 | 6.64827834 | Microcoleus sp. PCC 8701 | 272133 | Bacteria | Bacteria | 267 | 7.529999999999999e-67 | NTclustered | gi|46409899|gb|AY584524.1| | 272133 | g8090 | i0 | 88.106 | 139.391304347826 | 227 | 23 | 89 | 4 | 1 | 225 | 862 | 1086 | Microcoleus sp. PCC 8701 23S ribosomal RNA gene, partial sequence | blastn | 35266 | 267 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus sp. PCC 8701 | |
| 13036991 | 13036991 | PRJNA1129273_P_NODE_7851_length_260_cov_2.588235_g7571_i0 | PRJNA1129273 | 7851 | 260 | 2.588235 | 6.729411 | Pleurocapsa concharum | 980867 | Bacteria | Bacteria | 477 | 3.3e-130 | NTclustered | gi|322504116|emb|FR798927.1| | 980868 | g7571 | i0 | 100 | 101.880769230769 | 258 | 0 | 99 | 0 | 2 | 259 | 847 | 590 | Pleurocapsa concharum VP3-02 partial 16S rRNA gene, strain VP3-02 | blastn | 26489 | 477 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pleurocapsales | Hyellaceae | Pleurocapsa | Pleurocapsa concharum | |
| 13784997 | 13784997 | PRJNA1129273_P_NODE_10751_length_239_cov_2.765060_g10471_i0 | PRJNA1129273 | 10751 | 239 | 2.76506 | 6.6084934 | Hassallia | 482629 | Bacteria | Bacteria | 363 | 8.74e-96 | NTclustered | gi|1519336825|gb|MK211226.1| | 2489140 | g10471 | i0 | 97.209 | 257.928870292887 | 215 | 5 | 90 | 1 | 24 | 238 | 2229 | 2442 | Hassallia byssoidea KZ-2-2-3 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence | blastn | 61645 | 363 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Tolypothrichaceae | Hassallia | Hassallia byssoidea | |
| 13785003 | 13785003 | PRJNA1129273_P_NODE_291_length_1599_cov_11.199214_g194_i0 | PRJNA1129273 | 291 | 1599 | 11.199214 | 179.07543186 | Chroococcidiopsis | 54298 | Bacteria | Bacteria | 2115 | 0 | NTclustered | gi|2245450207|gb|CP083761.1| | 155894 | g194 | i0 | 90.841 | 103.249530956848 | 1594 | 124 | 99 | 17 | 2 | 1586 | 795691 | 794111 | Chroococcidiopsis sp. CCMEE 29 chromosome | blastn | 165096 | 2128 | 0.993890977443609 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | Chroococcidiopsis sp. CCMEE 29 | |
| 14312247 | 14312247 | PRJNA1129273_P_NODE_9872_length_245_cov_0.901163_g9592_i0 | PRJNA1129273 | 9872 | 245 | 0.901163 | 2.20784935 | Aliterella atlantica | 1827278 | Bacteria | Bacteria | 142 | 2.88e-40 | NR | WP_045052785.1 | 1827278 | g9592 | i0 | 88.9 | 0.991836734693878 | 81 | 9 | 99.2 | 0 | 243 | 1 | 143 | 223 | WP_045052785.1 ATP-dependent Clp protease proteolytic subunit [Aliterella atlantica] | diamond | 243 | 142 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella atlantica | |
| 15059361 | 15059361 | PRJNA1129273_P_NODE_1372_length_716_cov_2.279938_g1116_i0 | PRJNA1129273 | 1372 | 716 | 2.279938 | 16.32435608 | Nostocales | 1161 | Bacteria | Bacteria | 1179 | 0 | NTclustered | gi|427347790|gb|CP003943.1| | 99598 | g1116 | i0 | 96.508 | 297.719273743017 | 716 | 20 | 99 | 5 | 3 | 716 | 1915827 | 1916539 | Calothrix sp. PCC 7507 chromosome, complete genome | blastn | 213167 | 1190 | 0.990756302521008 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Calotrichaceae | Calothrix | Calothrix sp. PCC 7507 | |
| 15586218 | 15586218 | PRJNA1129273_P_NODE_9653_length_246_cov_1.098266_g9373_i0 | PRJNA1129273 | 9653 | 246 | 1.098266 | 2.70173436 | Nostoc flagelliforme | 1306274 | Bacteria | Bacteria | 431 | 2.4399999999999992e-116 | NTclustered | gi|1297075411|gb|CP024785.1| | 2038116 | g9373 | i0 | 98.367 | 259.349593495935 | 245 | 4 | 99 | 0 | 1 | 245 | 30604 | 30848 | Nostoc flagelliforme CCNUN1 chromosome, complete genome | blastn | 63800 | 431 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc flagelliforme | |
| 18135042 | 18135042 | PRJNA1129273_P_NODE_7795_length_261_cov_1.643617_g7515_i0 | PRJNA1129273 | 7795 | 261 | 1.643617 | 4.28984037 | Phormidium nigroviride | 482564 | Bacteria | Bacteria | 257 | 4.7e-64 | NTclustered | gi|428238862|gb|CP003614.1| | 179408 | g7515 | i0 | 89.048 | 1.72030651340996 | 210 | 20 | 80 | 1 | 52 | 261 | 3776413 | 3776207 | Oscillatoria nigro-viridis PCC 7112 chromosome, complete genome | blastn | 449 | 257 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Phormidium | Phormidium nigroviride | |
| 21433566 | 21433566 | PRJNA1129273_P_NODE_3157_length_418_cov_3.217391_g2878_i0 | PRJNA1129273 | 3157 | 418 | 3.217391 | 13.44869438 | Calothrix | 1186 | Bacteria | Bacteria | 640 | 6.749999999999999e-179 | NTclustered | gi|428233323|gb|CP003610.1| | 1170562 | g2878 | i0 | 94.272 | 211.117224880383 | 419 | 22 | 99 | 1 | 1 | 417 | 4990252 | 4989834 | Calothrix sp. PCC 6303, complete genome | blastn | 88247 | 643 | 0.995334370139969 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Calotrichaceae | Calothrix | Calothrix sp. PCC 6303 | |
| 23235563 | 23235563 | PRJNA1129273_P_NODE_11179_length_226_cov_4.568627_g10899_i0 | PRJNA1129273 | 11179 | 226 | 4.568627 | 10.32509702 | Spirirestis rafaelensis | 293980 | Bacteria | Bacteria | 399 | 6.239999999999999e-107 | NTclustered | gi|1358126427|gb|KY963625.1| | 119528 | g10899 | i0 | 98.667 | 168.641592920354 | 225 | 3 | 99 | 0 | 1 | 225 | 611 | 387 | Spirirestis rafaelensis SRS70 strain UTEX B 2660 23S ribosomal RNA gene, partial sequence | blastn | 38113 | 399 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Tolypothrichaceae | Spirirestis | Spirirestis rafaelensis | |
| 23235581 | 23235581 | PRJNA1129273_P_NODE_4159_length_353_cov_1.103571_g3879_i0 | PRJNA1129273 | 4159 | 353 | 1.103571 | 3.89560563 | Microcoleus vaginatus | 119532 | Bacteria | Bacteria | 494 | 4.61e-135 | NTclustered | gi|2212798032|gb|CP031740.1| | 669365 | g3879 | i0 | 92.045 | 4.94050991501416 | 352 | 26 | 99 | 1 | 2 | 353 | 5013326 | 5013675 | Microcoleus vaginatus PCC 9802 chromosome, complete genome | blastn | 1744 | 494 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus vaginatus | |
| 28460108 | 28460108 | PRJNA1129273_P_NODE_426_length_1355_cov_3.113105_g292_i0 | PRJNA1129273 | 426 | 1355 | 3.113105 | 42.18257275 | Nostoc cycadae | 246795 | Bacteria | Bacteria | 79.3 | 1.32e-12 | NR | WP_245894956.1 | 246795 | g292 | i0 | 33.3 | 0.832472324723247 | 195 | 111 | 40.5 | 6 | 1328 | 780 | 50 | 237 | WP_245894956.1 CAP domain-containing protein [Nostoc cycadae] | diamond | 1128 | 79.3 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc cycadae | |
| 30891974 | 30891974 | PRJNA1129273_P_NODE_6214_length_285_cov_2.155660_g5934_i0 | PRJNA1129273 | 6214 | 285 | 2.15566 | 6.143631 | Synechocystis sp. PCC 75 | 1143 | Bacteria | Bacteria | 167 | 1.04e-45 | NR | WP_009633886.1 | 927677 | g5934 | i0 | 86.2 | 2.96842105263158 | 94 | 13 | 98.9 | 0 | 3 | 284 | 327 | 420 | WP_009633886.1 eIF2A-related protein [Synechocystis sp. PCC 7509] | diamond | 846 | 167 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Merismopediaceae | Synechocystis | Synechocystis sp. PCC 7509 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;