RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1126661", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1126661 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17608877 17608877 PRJNA1126661_P_NODE_82614_length_215_cov_5.443662_g82084_i0 PRJNA1126661 82614 215 5.443662 11.7038733 Tobamovirus 12234 Viruses Viruses 396 7.6e-106   NTclustered gi|2184811942|gb|MW430120.1| 12235 g82084 i0 100 99.5348837209302 214 0 99 0 1 214 5129 5342 Cucumber green mottle mosaic virus isolate WA-3, complete genome blastn 21400 396 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus viridimaculae
19408706 19408706 PRJNA1126661_P_NODE_79056_length_228_cov_6.348387_g78526_i0 PRJNA1126661 79056 228 6.348387 14.47432236 Tobamovirus viridimaculae 3432895 Viruses Viruses 422 1.34e-113   NTclustered gi|2184811942|gb|MW430120.1| 12235 g78526 i0 100 100 228 0 100 0 1 228 1406 1633 Cucumber green mottle mosaic virus isolate WA-3, complete genome blastn 22800 422 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus viridimaculae
20683602 20683602 PRJNA1126661_P_NODE_17437_length_326_cov_4.426877_g16908_i0 PRJNA1126661 17437 326 4.426877 14.43161902 Allexivirus deltallii 3433711 Viruses Viruses 65.8 3.94e-6   NTclustered gi|2059392176|gb|MT279193.1| 12430 g16908 i0 100 0.107361963190184 35 0 11 0 254 288 35 1 Garlic virus D isolate GarVD_BR, complete genome blastn 35 65.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus deltallii
21432763 21432763 PRJNA1126661_P_NODE_26757_length_326_cov_2.976285_g26228_i0 PRJNA1126661 26757 326 2.976285 9.7026891 Tobamovirus 12234 Viruses Viruses 508 1.51e-139   NTclustered gi|2497646326|gb|OQ198404.1| 12235 g26228 i0 92.355 100.306748466258 327 24 100 1 1 326 627 301 Cucumber green mottle mosaic virus isolate NT-2015-02, partial genome blastn 32700 508 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus viridimaculae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;