RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1126661" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126661 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28007181 28007181 PRJNA1126661_P_NODE_69465_length_254_cov_4.596685_g68935_i0 PRJNA1126661 69465 254 4.596685 11.6755799 Bacteria 2 Bacteria Bacteria 73.6 5.99e-13   NR MBM3198334.1 2081524 g68935 i0 42.9 2.18503937007874 91 41 96.9 2 9 254 567 655 MBM3198334.1 hypothetical protein [Chlamydiota bacterium] diamond 555 74.3 0.990578734858681 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28270267 28270267 PRJNA1126661_P_NODE_66606_length_262_cov_2.597884_g66076_i0 PRJNA1126661 66606 262 2.597884 6.80645608 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 145 2.51e-38   NR HEY5259032.1 2047756 g66076 i0 76.7 0.984732824427481 86 20 98.5 0 1 258 719 804 HEY5259032.1 leucine--tRNA ligase [Rhabdochlamydiaceae bacterium] diamond 258 145 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
28890869 28890869 PRJNA1126661_P_NODE_27048_length_326_cov_2.944664_g26519_i0 PRJNA1126661 27048 326 2.944664 9.59960464 Chlamydiia 204429 Bacteria Bacteria 92.4 2.04e-21   NR OJU81100.1 1895742 g26519 i0 85.7 1.35276073619632 49 7 45.1 0 178 324 32 80 OJU81100.1 MAG: hypothetical protein BGO10_09345 [Chlamydia sp. 32-24] diamond 441 92.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia sp. 32-24
30196523 30196523 PRJNA1126661_P_NODE_20772_length_326_cov_3.794466_g20243_i0 PRJNA1126661 20772 326 3.794466 12.36995916 Chlamydia psittaci 83554 Bacteria Bacteria 76.6 2.79e-16   NR EPJ16943.1 1112257 g20243 i0 94.4 0.331288343558282 36 2 33.1 0 13 120 2 37 EPJ16943.1 hypothetical protein CP02DC21_1873, partial [Chlamydia psittaci 02DC21] diamond 108 76.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
30228208 30228208 PRJNA1126661_P_NODE_54912_length_289_cov_1.861111_g54383_i0 PRJNA1126661 54912 289 1.861111 5.37861079 Chlamydiota bacterium 2081524 Bacteria Bacteria 110 2.75e-28   NR MES2121597.1 2081524 g54383 i0 96.7 0.633217993079585 61 2 63.3 0 3 185 126 186 MES2121597.1 hypothetical protein [Chlamydiota bacterium] diamond 183 110 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32409968 32409968 PRJNA1126661_P_NODE_79719_length_226_cov_8.745098_g79189_i0 PRJNA1126661 79719 226 8.745098 19.76392148 Criblamydia sequanensis 340071 Bacteria Bacteria 49.7 1.05e-4   NR WP_053331934.1 340071 g79189 i0 59 0.517699115044248 39 16 51.8 0 126 10 3 41 WP_053331934.1 glycosyltransferase family protein [Criblamydia sequanensis] diamond 117 49.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Candidatus Criblamydia Candidatus Criblamydia sequanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;