RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126661", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA1126661 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28396751 28396751 PRJNA1126661_P_NODE_76766_length_235_cov_5.432099_g76236_i0 PRJNA1126661 76766 235 5.432099 12.76543265 Thermoplasmatota archaeon 2806419 Archaea Archaea 108 7.28e-27   NR MEK6975271.1 2806419 g76236 i0 68 2.89787234042553 75 24 95.7 0 234 10 98 172 MEK6975271.1 Ku protein [Thermoplasmatota archaeon] diamond 681 108 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30355193 30355193 PRJNA1126661_P_NODE_30952_length_325_cov_5.595238_g30423_i0 PRJNA1126661 30952 325 5.595238 18.1845235 Thermoplasmatota archaeon 2806419 Archaea Archaea 88.2 1.07e-17   NR HUR68234.1 2806419 g30423 i0 89.8 3.15692307692308 49 5 45.2 0 177 323 590 638 HUR68234.1 NADP-dependent malic enzyme [Thermoplasmatota archaeon] diamond 1026 88.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;