RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1126661", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1126661 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29690954 29690954 PRJNA1126661_P_NODE_52370_length_293_cov_4.263636_g51841_i0 PRJNA1126661 52370 293 4.263636 12.49245348 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 51.2 5.8e-5   NR CAF1241599.1 1234261 g51841 i0 47.9 0.491467576791809 48 25 49.1 0 149 6 120 167 CAF1241599.1 unnamed protein product [Didymodactylos carnosus] diamond 144 51.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
31618904 31618904 PRJNA1126661_P_NODE_43876_length_300_cov_4.211454_g43347_i0 PRJNA1126661 43876 300 4.211454 12.634362 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 53.5 1.07e-5   NR CAF0934377.1 104777 g43347 i0 53.7 1.23 41 19 41 0 280 158 108 148 CAF0934377.1 unnamed protein product [Brachionus calyciflorus] diamond 369 53.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32504968 32504968 PRJNA1126661_P_NODE_18959_length_326_cov_4.106719_g18430_i0 PRJNA1126661 18959 326 4.106719 13.38790394 Adineta vaga 104782 Rotifera other_Eukaryota 60.1 4.02e-9   NR UJR13156.1 104782 g18430 i0 66.7 0.414110429447853 45 15 41.4 0 178 312 49 93 UJR13156.1 hypothetical protein I4U23_000180 [Adineta vaga] diamond 135 60.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;