RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126661", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1126661 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30659699 30659699 PRJNA1126661_P_NODE_31893_length_321_cov_1.572581_g31364_i0 PRJNA1126661 31893 321 1.572581 5.04798501 root 1 Root_unresolved Root_unresolved 79.7 1.02e-14   NR XP_013420599.1 7574 g31364 i0 52.1 5.10280373831776 73 28 61.7 4 4 201 138 210 XP_013420599.1 neurogenic locus notch homolog protein 1 [Lingula anatina] diamond 1638 80.1 0.995006242197254 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31418211 31418211 PRJNA1126661_P_NODE_76076_length_237_cov_7.310976_g75546_i0 PRJNA1126661 76076 237 7.310976 17.32701312 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 69.3 1.56e-11   NR XP_013391678.1 7574 g75546 i0 50 3.59493670886076 68 33 84.8 1 22 222 162 229 XP_013391678.1 echinoderm microtubule-associated protein-like 6 [Lingula anatina] diamond 852 69.7 0.994261119081779 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;