RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126661", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA1126661 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1556685 1556685 PRJNA1126661_P_NODE_10862_length_326_cov_6.747036_g10333_i0 PRJNA1126661 10862 326 6.747036 21.99533736 Inoviridae sp. 2219103 Viruses Viruses 226 1.7099999999999994e-54   NTclustered gi|2053040871|tpg|BK024249.1| 2219103 g10333 i0 94.521 45.5858895705521 146 8 45 0 180 325 10295 10150 MAG TPA_asm: Inoviridae sp. isolate ct4CW1, partial genome blastn 14861 226 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
6660116 6660116 PRJNA1126661_P_NODE_2566_length_560_cov_3.457906_g2056_i0 PRJNA1126661 2566 560 3.457906 19.3642736 Inoviridae sp. 2219103 Viruses Viruses 250 1.82e-61   NTclustered gi|2057891989|tpg|BK051014.1| 2219103 g2056 i0 76.829 0.882142857142857 410 79 72 10 154 558 2154 2552 MAG TPA_asm: Inoviridae sp. isolate ctfkp1, partial genome blastn 494 250 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;