RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1126661", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1126661 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18133933 18133933 PRJNA1126661_P_NODE_20255_length_326_cov_3.885375_g19726_i0 PRJNA1126661 20255 326 3.885375 12.6663225 Comanthus parvicirrus 1529418 Echinodermata other_Eukaryota 52.8 0.031   NTclustered gi|2158459555|gb|MW526392.2| 1529418 g19726 i0 100 0.171779141104294 28 0 9 0 3 30 11253 11226 Comanthus parvicirrus mitochondrion, complete genome blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Comanthus Comanthus parvicirrus
27670741 27670741 PRJNA1126661_P_NODE_25784_length_326_cov_3.075099_g25255_i0 PRJNA1126661 25784 326 3.075099 10.02482274 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 86.7 2.34e-17   NR XP_030832249.1 7668 g25255 i0 38.5 2.62269938650307 143 45 92 2 22 321 167 309 XP_030832249.1 uncharacterized protein LOC115920526 [Strongylocentrotus purpuratus] diamond 855 86.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
27691587 27691587 PRJNA1126661_P_NODE_37184_length_301_cov_4.631579_g36655_i0 PRJNA1126661 37184 301 4.631579 13.94105279 Opisthokonta 33154 Echinodermata other_Eukaryota 44.3 0.0188   NR PIK49897.1 307972 g36655 i0 38.5 1.41528239202658 65 38 64.8 1 226 32 131 193 PIK49897.1 hypothetical protein BSL78_13219 [Apostichopus japonicus] diamond 426 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;