contig_metadata
17 rows where bioproject = "PRJNA1126661", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2833018 | 2833018 | PRJNA1126661_P_NODE_33363_length_301_cov_9.771930_g32834_i0 | PRJNA1126661 | 33363 | 301 | 9.77193 | 29.4135093 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 80.1 | 5.36e-15 | NR | HEX6048367.1 | 2026741 | g32834 | i0 | 80.9 | 0.46843853820598 | 47 | 9 | 46.8 | 0 | 142 | 2 | 1 | 47 | HEX6048367.1 FAD-dependent oxidoreductase [Gemmatimonadaceae bacterium] | diamond | 141 | 80.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 7935210 | 7935210 | PRJNA1126661_P_NODE_21967_length_326_cov_3.596838_g21438_i0 | PRJNA1126661 | 21967 | 326 | 3.596838 | 11.72569188 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 132 | 3.83e-26 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g21438 | i0 | 84.962 | 6.68098159509202 | 133 | 16 | 40 | 4 | 1 | 131 | 150200 | 150070 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 2178 | 132 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10486240 | 10486240 | PRJNA1126661_P_NODE_65669_length_264_cov_4.345550_g65139_i0 | PRJNA1126661 | 65669 | 264 | 4.34555 | 11.472252 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 119 | 4.11e-29 | NR | MFL5620983.1 | 2026741 | g65139 | i0 | 72.1 | 0.977272727272727 | 86 | 24 | 97.7 | 0 | 263 | 6 | 84 | 169 | MFL5620983.1 ADOP family duplicated permease [Gemmatimonadaceae bacterium] | diamond | 258 | 119 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 11234373 | 11234373 | PRJNA1126661_P_NODE_45689_length_299_cov_5.933628_g45160_i0 | PRJNA1126661 | 45689 | 299 | 5.933628 | 17.74154772 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 96.7 | 4.64e-21 | NR | HEX7942347.1 | 2026741 | g45160 | i0 | 91.8 | 1.97658862876254 | 49 | 4 | 49.2 | 0 | 152 | 298 | 162 | 210 | HEX7942347.1 amidohydrolase family protein [Gemmatimonadaceae bacterium] | diamond | 591 | 96.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 15585452 | 15585452 | PRJNA1126661_P_NODE_47273_length_298_cov_5.257778_g46744_i0 | PRJNA1126661 | 47273 | 298 | 5.257778 | 15.66817844 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 74.3 | 2.91e-13 | NR | HWV58261.1 | 2910168 | g46744 | i0 | 80.9 | 0.473154362416107 | 47 | 9 | 47.3 | 0 | 1 | 141 | 127 | 173 | HWV58261.1 NADP-dependent oxidoreductase [Longimicrobiales bacterium] | diamond | 141 | 74.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 18134638 | 18134638 | PRJNA1126661_P_NODE_84495_length_209_cov_4.588235_g83965_i0 | PRJNA1126661 | 84495 | 209 | 4.588235 | 9.58941115 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 115 | 8.16e-28 | NR | HYH81956.1 | 2029185 | g83965 | i0 | 76.8 | 0.990430622009569 | 69 | 16 | 99 | 0 | 207 | 1 | 2805 | 2873 | HYH81956.1 amino acid adenylation domain-containing protein [Longimicrobium sp.] | diamond | 207 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 20157217 | 20157217 | PRJNA1126661_P_NODE_20636_length_326_cov_3.818182_g20107_i0 | PRJNA1126661 | 20636 | 326 | 3.818182 | 12.44727332 | Gemmatimonas sp. UBA7669 | 1946568 | Bacteria | Bacteria | 111 | 3.73e-29 | NR | WP_291160863.1 | 1946568 | g20107 | i0 | 100 | 0.460122699386503 | 50 | 0 | 46 | 0 | 1 | 150 | 26 | 75 | WP_291160863.1 6-carboxytetrahydropterin synthase QueD [Gemmatimonas sp. UBA7669] | diamond | 150 | 111 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. UBA7669 | |
| 21959175 | 21959175 | PRJNA1126661_P_NODE_35458_length_301_cov_5.899123_g34929_i0 | PRJNA1126661 | 35458 | 301 | 5.899123 | 17.75636023 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 117 | 9.79e-22 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g34929 | i0 | 84.615 | 26.0066445182724 | 117 | 18 | 39 | 0 | 31 | 147 | 4861305 | 4861421 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 7828 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 24508239 | 24508239 | PRJNA1126661_P_NODE_25500_length_326_cov_3.114625_g24971_i0 | PRJNA1126661 | 25500 | 326 | 3.114625 | 10.1536775 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 82.4 | 4.7e-17 | NR | HEX9055690.1 | 2448054 | g24971 | i0 | 78 | 0.920245398773006 | 50 | 11 | 46 | 0 | 150 | 1 | 13 | 62 | HEX9055690.1 lipocalin family protein [Gemmatimonadales bacterium] | diamond | 300 | 82.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 26880658 | 26880658 | PRJNA1126661_P_NODE_7581_length_326_cov_12.075099_g7052_i0 | PRJNA1126661 | 7581 | 326 | 12.075099 | 39.36482274 | Gemmatimonas sp. | 1962908 | Bacteria | Bacteria | 53.9 | 1.19e-5 | NR | MCO4098246.1 | 1962908 | g7052 | i0 | 58.3 | 2.19938650306748 | 48 | 16 | 43.3 | 2 | 186 | 326 | 24 | 68 | MCO4098246.1 class I SAM-dependent DNA methyltransferase [Gemmatimonas sp.] | diamond | 717 | 53.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. | |
| 28933560 | 28933560 | PRJNA1126661_P_NODE_19068_length_326_cov_4.090909_g18539_i0 | PRJNA1126661 | 19068 | 326 | 4.090909 | 13.33636334 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 47.4 | 7.62e-4 | NR | HWJ21061.1 | 2026741 | g18539 | i0 | 90 | 0.184049079754601 | 20 | 2 | 18.4 | 0 | 1 | 60 | 96 | 115 | HWJ21061.1 HNH endonuclease [Gemmatimonadaceae bacterium] | diamond | 60 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29028547 | 29028547 | PRJNA1126661_P_NODE_70048_length_253_cov_2.288889_g69518_i0 | PRJNA1126661 | 70048 | 253 | 2.288889 | 5.79088917 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.1 | 0.03 | NR | HEY7234229.1 | 2026741 | g69518 | i0 | 33.3 | 0.99604743083004 | 84 | 46 | 87.7 | 2 | 19 | 240 | 140 | 223 | HEY7234229.1 PQQ-binding-like beta-propeller repeat protein [Gemmatimonadaceae bacterium] | diamond | 252 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29438315 | 29438315 | PRJNA1126661_P_NODE_17650_length_326_cov_4.383399_g17121_i0 | PRJNA1126661 | 17650 | 326 | 4.383399 | 14.28988074 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 85.1 | 8.18e-17 | NR | MFL5381238.1 | 3047548 | g17121 | i0 | 41.3 | 2.25460122699387 | 121 | 43 | 85.6 | 2 | 326 | 48 | 69 | 189 | MFL5381238.1 reverse transcriptase family protein [Longimicrobiaceae bacterium] | diamond | 735 | 85.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 29659298 | 29659298 | PRJNA1126661_P_NODE_24390_length_326_cov_3.292490_g23861_i0 | PRJNA1126661 | 24390 | 326 | 3.29249 | 10.7335174 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 63.5 | 1.58e-10 | NR | MBK8246349.1 | 2026742 | g23861 | i0 | 79.4 | 0.312883435582822 | 34 | 7 | 31.3 | 0 | 133 | 32 | 62 | 95 | MBK8246349.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 102 | 63.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30765435 | 30765435 | PRJNA1126661_P_NODE_70534_length_252_cov_0.871508_g70004_i0 | PRJNA1126661 | 70534 | 252 | 0.871508 | 2.19620016 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 43.9 | 0.0159 | NR | HUP01797.1 | 2026742 | g70004 | i0 | 61.5 | 1.11904761904762 | 39 | 12 | 42.9 | 1 | 144 | 251 | 6 | 44 | HUP01797.1 electron transfer flavoprotein-ubiquinone oxidoreductase [Gemmatimonadota bacterium] | diamond | 282 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30849265 | 30849265 | PRJNA1126661_P_NODE_11854_length_326_cov_6.221344_g11325_i0 | PRJNA1126661 | 11854 | 326 | 6.221344 | 20.28158144 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 94.7 | 2.35e-20 | NR | MDQ3081507.1 | 2026742 | g11325 | i0 | 77.6 | 1.35276073619632 | 49 | 11 | 45.1 | 0 | 326 | 180 | 202 | 250 | MDQ3081507.1 ribonuclease J [Gemmatimonadota bacterium] | diamond | 441 | 94.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31112765 | 31112765 | PRJNA1126661_P_NODE_46275_length_299_cov_3.446903_g45746_i0 | PRJNA1126661 | 46275 | 299 | 3.446903 | 10.30623997 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 73.6 | 8.29e-14 | NR | HWP36559.1 | 2448054 | g45746 | i0 | 72.9 | 0.963210702341137 | 48 | 13 | 48.2 | 0 | 299 | 156 | 123 | 170 | HWP36559.1 GNAT family protein [Gemmatimonadales bacterium] | diamond | 288 | 73.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;