RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126661", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1126661 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26964373 26964373 PRJNA1126661_P_NODE_12002_length_326_cov_6.146245_g11473_i0 PRJNA1126661 12002 326 6.146245 20.0367587 Bacteria 2 Bacteria Bacteria 110 1.83e-26   NR RAL55854.1 1912928 g11473 i0 62.1 1.89570552147239 103 9 67.2 1 219 1 212 314 RAL55854.1 hypothetical protein BLD25_03390 [Candidatus Gracilibacteria bacterium GN02-872] diamond 618 110 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-872
30765411 30765411 PRJNA1126661_P_NODE_12854_length_326_cov_5.778656_g12325_i0 PRJNA1126661 12854 326 5.778656 18.83841856 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 105 6.92e-24   NR RAL55970.1 1914866 g12325 i0 100 0.460122699386503 50 0 46 0 326 177 779 828 RAL55970.1 hypothetical protein BLM37_00295 [Candidatus Gracilibacteria bacterium GN02-873] diamond 150 105 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;