RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1126198", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1126198 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27859819 27859819 PRJNA1126198_P_NODE_471645_length_242_cov_0.911243_g470924_i0 PRJNA1126198 471645 242 0.911243 2.20520806 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 55.8 6.1e-7   NR HET7242770.1 2169593 g470924 i0 92.6 0.334710743801653 27 2 33.5 0 162 242 23 49 HET7242770.1 archaeal heat shock protein Hsp20 [Nitrososphaeraceae archaeon] diamond 81 55.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31935072 31935072 PRJNA1126198_P_NODE_228797_length_284_cov_1.199052_g228076_i0 PRJNA1126198 228797 284 1.199052 3.40530768 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 55.8 1.45e-6   NR MDW0281973.1 2169593 g228076 i0 85.2 0.285211267605634 27 4 28.5 0 40 120 314 340 MDW0281973.1 PQQ-dependent sugar dehydrogenase [Nitrososphaeraceae archaeon] diamond 81 55.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32473321 32473321 PRJNA1126198_P_NODE_407379_length_248_cov_0.885714_g406658_i0 PRJNA1126198 407379 248 0.885714 2.19657072 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 128 1.4399999999999999e-32   NR HZA43234.1 2169593 g406658 i0 75.6 1.98387096774194 82 20 99.2 0 247 2 413 494 HZA43234.1 glutamate--tRNA ligase [Nitrososphaeraceae archaeon] diamond 492 128 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;