RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where bioproject = "PRJNA1126198" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126198 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2305509 2305509 PRJNA1126198_P_NODE_18002_length_506_cov_1.133949_g17312_i0 PRJNA1126198 18002 506 1.133949 5.73778194 Metazoa 33208 Mollusca Mollusca 56.5 0.004   NTclustered gi|2671789902|gb|PP198933.1| 31199 g17312 i0 97.059 0.681818181818182 34 0 7 1 86 118 11534 11567 Argopecten irradians clone evm.model.130.122 spatiotemporal phototransduction pathway protein gene, complete cds blastn 345 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
5384472 5384472 PRJNA1126198_P_NODE_256725_length_276_cov_1.536946_g256004_i0 PRJNA1126198 256725 276 1.536946 4.24197096 Mizuhopecten yessoensis 6573 Mollusca Mollusca 158 5.23e-34   NTclustered gi|1207979960|ref|XM_021483822.1| 6573 g256004 i0 84.906 2.8804347826087 159 20 57 4 1 157 256 100 PREDICTED: Mizuhopecten yessoensis 40S ribosomal protein S11-A-like (LOC110440659), partial mRNA blastn 795 158 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
6659751 6659751 PRJNA1126198_P_NODE_77966_length_361_cov_11.375000_g77249_i0 PRJNA1126198 77966 361 11.375 41.06375 Potamilus streckersoni 2493646 Mollusca Mollusca 130 1.59e-36   NR KAK3592046.1 2493646 g77249 i0 69.2 2.53462603878116 91 25 73.1 1 350 87 1 91 KAK3592046.1 hypothetical protein CHS0354_019301 [Potamilus streckersoni] diamond 915 130 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni
13034780 13034780 PRJNA1126198_P_NODE_12231_length_560_cov_5.525667_g11553_i0 PRJNA1126198 12231 560 5.525667 30.9437352 Mactra antiquata 2302425 Mollusca Mollusca 129 1.37e-33   NR KAL4224502.1 2302425 g11553 i0 59.8 13.5107142857143 102 41 54.6 0 2 307 34 135 KAL4224502.1 ribosomal 40S subunit protein S10A [Mactra antiquata] diamond 7566 129 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Mactridae Mactra Mactra antiquata
15584816 15584816 PRJNA1126198_P_NODE_8913_length_618_cov_7.750459_g8251_i0 PRJNA1126198 8913 618 7.750459 47.89783662 Metazoa 33208 Mollusca Mollusca 162 5.609999999999998e-47   NR XP_052229778.1 45954 g8251 i0 54.1 2.80097087378641 170 77 82 1 612 106 1 170 XP_052229778.1 60S ribosomal protein L23a-like [Dreissena polymorpha] diamond 1731 163 0.993865030674847 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
18133161 18133161 PRJNA1126198_P_NODE_32895_length_437_cov_11.434066_g32186_i0 PRJNA1126198 32895 437 11.434066 49.96686842 Metazoa 33208 Mollusca Mollusca 176 5.09e-54   NR KAL5014429.1 13268 g32186 i0 76.3 9.80320366132723 114 26 77.6 1 425 87 19 132 KAL5014429.1 hypothetical protein ScPMuIL_008699 [Solemya velum] diamond 4284 176 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum
21432100 21432100 PRJNA1126198_P_NODE_129357_length_324_cov_1.215139_g128638_i0 PRJNA1126198 129357 324 1.215139 3.93705036 Bivalvia 6544 Mollusca Mollusca 133 1.3e-33   NR XP_060580366.1 129788 g128638 i0 60 2.91666666666667 105 42 97.2 0 9 323 790 894 XP_060580366.1 annexin A6-like [Ruditapes philippinarum] diamond 945 133 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
27038619 27038619 PRJNA1126198_P_NODE_106262_length_338_cov_1.452830_g105543_i0 PRJNA1126198 106262 338 1.45283 4.9105654 Patella vulgata 6465 Mollusca Mollusca 75.1 4.78e-13   NR XP_050413253.1 6465 g105543 i0 42 0.887573964497041 100 54 86.1 3 30 320 8 106 XP_050413253.1 cytochrome P450 4F4 [Patella vulgata] diamond 300 75.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
27228212 27228212 PRJNA1126198_P_NODE_376863_length_251_cov_0.876404_g376142_i0 PRJNA1126198 376863 251 0.876404 2.19977404 Aplysia californica 6500 Mollusca Mollusca 117 8.29e-31   NR XP_005107358.1 6500 g376142 i0 70.7 7.17131474103586 75 22 89.6 0 2 226 148 222 XP_005107358.1 elongation factor 1-beta [Aplysia californica] diamond 1800 117 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
27754620 27754620 PRJNA1126198_P_NODE_391084_length_249_cov_2.125000_g390363_i0 PRJNA1126198 391084 249 2.125 5.29125 Metazoa 33208 Mollusca Mollusca 112 1.27e-26   NR XP_022342767.1 6565 g390363 i0 60.2 6 83 33 100 0 249 1 629 711 XP_022342767.1 uncharacterized protein LOC111136303 [Crassostrea virginica] diamond 1494 113 0.991150442477876 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
28796130 28796130 PRJNA1126198_P_NODE_201007_length_292_cov_1.525114_g200287_i0 PRJNA1126198 201007 292 1.525114 4.45333288 Bivalvia 6544 Mollusca Mollusca 55.8 1.24e-6   NR KAK3104100.1 66713 g200287 i0 36 1.82876712328767 89 51 85.3 4 255 7 128 216 KAK3104100.1 hypothetical protein FSP39_024411 [Pinctada imbricata] diamond 534 56.2 0.99288256227758 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pteriidae Pinctada Pinctada imbricata
28796136 28796136 PRJNA1126198_P_NODE_89227_length_351_cov_1.464029_g88509_i0 PRJNA1126198 89227 351 1.464029 5.13874179 Mollusca 6447 Mollusca Mollusca 75.9 2.98e-13   NR XP_055896913.1 6526 g88509 i0 39.8 6.86324786324786 113 53 96.6 5 12 350 163 260 XP_055896913.1 tyramine beta-hydroxylase-like [Biomphalaria glabrata] diamond 2409 76.3 0.99475753604194 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
29396248 29396248 PRJNA1126198_P_NODE_291769_length_267_cov_2.912371_g291048_i0 PRJNA1126198 291769 267 2.912371 7.77603057 Metazoa 33208 Mollusca Mollusca 99 4.019999999999999e-23   NR KAH9525105.1 55810 g291048 i0 56.6 25.9438202247191 83 36 93.3 0 250 2 94 176 KAH9525105.1 60S ribosomal protein L24 [Bulinus truncatus] diamond 6927 99.8 0.991983967935872 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus
29501702 29501702 PRJNA1126198_P_NODE_281170_length_270_cov_1.573604_g280449_i0 PRJNA1126198 281170 270 1.573604 4.2487308 Saccostrea cuccullata 36930 Mollusca Mollusca 42.7 0.0381   NR XP_062595705.1 36930 g280449 i0 28 0.833333333333333 75 49 77.8 2 48 257 17 91 XP_062595705.1 uncharacterized protein LOC134257074 [Saccostrea cuccullata] diamond 225 42.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
30638856 30638856 PRJNA1126198_P_NODE_238553_length_281_cov_1.490385_g237832_i0 PRJNA1126198 238553 281 1.490385 4.18798185 Mya arenaria 6604 Mollusca Mollusca 80.5 3.09e-15   NR XP_052788268.1 6604 g237832 i0 44.3 1.0355871886121 97 48 99.3 4 2 280 140 234 XP_052788268.1 uncharacterized protein LOC128223073 [Mya arenaria] diamond 291 80.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
31081434 31081434 PRJNA1126198_P_NODE_349335_length_255_cov_1.335165_g348614_i0 PRJNA1126198 349335 255 1.335165 3.40467075 Mya arenaria 6604 Mollusca Mollusca 70.1 9.8e-12   NR WAR26591.1 6604 g348614 i0 50.8 1.52941176470588 65 32 76.5 0 245 51 498 562 WAR26591.1 hypothetical protein MAR_012295 [Mya arenaria] diamond 390 70.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
31681948 31681948 PRJNA1126198_P_NODE_384977_length_250_cov_1.276836_g384256_i0 PRJNA1126198 384977 250 1.276836 3.19209 Dreissena polymorpha 45954 Mollusca Mollusca 51.2 4.29e-5   NR XP_052277938.1 45954 g384256 i0 39.7 1.632 68 35 81.6 3 37 240 877 938 XP_052277938.1 uncharacterized protein LOC127876646 isoform X4 [Dreissena polymorpha] diamond 408 51.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
31924277 31924277 PRJNA1126198_P_NODE_408657_length_248_cov_0.880000_g407936_i0 PRJNA1126198 408657 248 0.88 2.1824 Opisthokonta 33154 Mollusca Mollusca 51.2 4.14e-5   NR XP_046352911.2 6454 g407936 i0 44.9 10.4153225806452 69 35 83.5 2 40 246 838 903 XP_046352911.2 tubulin-specific chaperone D-like [Haliotis rufescens] diamond 2583 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
31924278 31924278 PRJNA1126198_P_NODE_432437_length_245_cov_1.802326_g431716_i0 PRJNA1126198 432437 245 1.802326 4.4156987 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84 5.81e-19   NR XP_022293841.1 6565 g431716 i0 60.6 1.6530612244898 71 28 86.9 0 224 12 2 72 XP_022293841.1 cystatin-B-like [Crassostrea virginica] diamond 405 84.7 0.991735537190083 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
32903422 32903422 PRJNA1126198_P_NODE_379380_length_251_cov_0.870787_g378659_i0 PRJNA1126198 379380 251 0.870787 2.18567537 root 1 Root_unresolved Root_unresolved 62.4 4.87e-9   NR XP_012938839.1 6500 g378659 i0 38.8 2.83266932270916 80 49 95.6 0 241 2 374 453 XP_012938839.1 kelch-like ECH-associated protein 1B [Aplysia californica] diamond 711 62.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;