contig_metadata
366 rows where bioproject = "PRJNA1126198" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 281103 | 281103 | PRJNA1126198_P_NODE_134601_length_321_cov_1.250000_g133882_i0 | PRJNA1126198 | 134601 | 321 | 1.25 | 4.0125 | Campylobacter | 194 | Bacteria | Bacteria | 165 | 6.99e-45 | NR | WP_107850171.1 | 199 | g133882 | i0 | 74.5 | 11.9252336448598 | 106 | 27 | 99.1 | 0 | 1 | 318 | 573 | 678 | WP_107850171.1 DNA polymerase I [Campylobacter concisus] | diamond | 3828 | 166 | 0.993975903614458 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 281133 | 281133 | PRJNA1126198_P_NODE_154541_length_311_cov_1.294118_g153822_i0 | PRJNA1126198 | 154541 | 311 | 1.294118 | 4.02470698 | Campylobacter | 194 | Bacteria | Bacteria | 168 | 2.75e-51 | NR | WP_002850139.1 | 194 | g153822 | i0 | 81.8 | 2.85530546623794 | 99 | 18 | 95.5 | 0 | 2 | 298 | 58 | 156 | WP_002850139.1 MULTISPECIES: 6,7-dimethyl-8-ribityllumazine synthase [Campylobacter] | diamond | 888 | 168 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 281312 | 281312 | PRJNA1126198_P_NODE_253321_length_277_cov_1.519608_g252600_i0 | PRJNA1126198 | 253321 | 277 | 1.519608 | 4.20931416 | Campylobacter showae | 204 | Bacteria | Bacteria | 139 | 2.09e-38 | NR | WP_002949758.1 | 204 | g252600 | i0 | 75.6 | 3.86642599277978 | 90 | 18 | 97.5 | 1 | 6 | 275 | 135 | 220 | WP_002949758.1 prolipoprotein diacylglyceryl transferase [Campylobacter showae] | diamond | 1071 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 281615 | 281615 | PRJNA1126198_P_NODE_415661_length_247_cov_0.896552_g414940_i0 | PRJNA1126198 | 415661 | 247 | 0.896552 | 2.21448344 | Campylobacter concisus | 199 | Bacteria | Bacteria | 407 | 4.14e-109 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g414940 | i0 | 96.356 | 14.9878542510121 | 247 | 9 | 100 | 0 | 1 | 247 | 974008 | 974254 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 3702 | 407 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 281626 | 281626 | PRJNA1126198_P_NODE_418741_length_247_cov_0.890805_g418020_i0 | PRJNA1126198 | 418741 | 247 | 0.890805 | 2.20028835 | Campylobacter sp. CS_NA3 | 2984142 | Bacteria | Bacteria | 187 | 5.87e-43 | NTclustered | gi|2427057555|gb|CP115609.1| | 2984142 | g418020 | i0 | 84.021 | 3.07287449392713 | 194 | 31 | 79 | 0 | 11 | 204 | 13166 | 12973 | Campylobacter sp. CS_NA3 strain Cs NA3 chromosome | blastn | 759 | 187 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CS_NA3 | ||
| 281913 | 281913 | PRJNA1126198_P_NODE_75061_length_364_cov_2.814433_g74344_i0 | PRJNA1126198 | 75061 | 364 | 2.814433 | 10.24453612 | Campylobacter sp. RM16187 | 1660063 | Bacteria | Bacteria | 217 | 1.16e-51 | NTclustered | gi|2305957902|gb|CP012550.1| | 1660063 | g74344 | i0 | 78.386 | 0.953296703296703 | 347 | 66 | 94 | 8 | 2 | 343 | 37973 | 38315 | Campylobacter sp. RM16187 plasmid p16187MP1, complete sequence | blastn | 347 | 217 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM16187 | ||
| 1030319 | 1030319 | PRJNA1126198_P_NODE_300161_length_265_cov_3.791667_g299440_i0 | PRJNA1126198 | 300161 | 265 | 3.791667 | 10.04791755 | Campylobacter | 194 | Bacteria | Bacteria | 329 | 9.99e-86 | NTclustered | gi|2093923041|gb|CP082872.1| | 76517 | g299440 | i0 | 89.474 | 2.00754716981132 | 266 | 20 | 100 | 5 | 1 | 265 | 3113 | 3371 | Campylobacter hominis strain FDAARGOS_1467 plasmid unnamed1, complete sequence | blastn | 532 | 329 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 1555888 | 1555888 | PRJNA1126198_P_NODE_239162_length_281_cov_1.408654_g238441_i0 | PRJNA1126198 | 239162 | 281 | 1.408654 | 3.95831774 | Campylobacter iguaniorum | 1244531 | Bacteria | Bacteria | 68.9 | 3.62e-11 | NR | WP_051870907.1 | 1244531 | g238441 | i0 | 46.3 | 0.875444839857651 | 82 | 43 | 86.5 | 1 | 243 | 1 | 683 | 764 | WP_051870907.1 HD domain-containing protein [Campylobacter iguaniorum] | diamond | 246 | 68.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter iguaniorum | ||
| 1556190 | 1556190 | PRJNA1126198_P_NODE_389902_length_250_cov_0.864407_g389181_i0 | PRJNA1126198 | 389902 | 250 | 0.864407 | 2.1610175 | Campylobacter showae | 204 | Bacteria | Bacteria | 436 | 5.349999999999999e-118 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g389181 | i0 | 98.387 | 10.912 | 248 | 4 | 99 | 0 | 3 | 250 | 766386 | 766633 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 2728 | 436 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 1556310 | 1556310 | PRJNA1126198_P_NODE_435842_length_245_cov_0.924419_g435121_i0 | PRJNA1126198 | 435842 | 245 | 0.924419 | 2.26482655 | Campylobacter concisus | 199 | Bacteria | Bacteria | 337 | 5.45e-88 | NTclustered | gi|1063302220|gb|CP000792.2| | 360104 | g435121 | i0 | 91.429 | 7.58367346938776 | 245 | 21 | 100 | 0 | 1 | 245 | 203644 | 203400 | Campylobacter concisus 13826 chromosome, complete genome | blastn | 1858 | 337 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 1556348 | 1556348 | PRJNA1126198_P_NODE_452682_length_243_cov_1.835294_g451961_i0 | PRJNA1126198 | 452682 | 243 | 1.835294 | 4.45976442 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 416 | 6.739999999999998e-112 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g451961 | i0 | 97.531 | 66.7654320987654 | 243 | 6 | 100 | 0 | 1 | 243 | 342504 | 342262 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 16224 | 416 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 1556383 | 1556383 | PRJNA1126198_P_NODE_470562_length_242_cov_0.917160_g469841_i0 | PRJNA1126198 | 470562 | 242 | 0.91716 | 2.2195272 | Campylobacter showae | 204 | Bacteria | Bacteria | 368 | 1.91e-97 | NTclustered | gi|1483583565|emb|LT631545.1| | 204 | g469841 | i0 | 94.191 | 12.6570247933884 | 241 | 14 | 99 | 0 | 1 | 241 | 1731408 | 1731168 | Campylobacter showae strain B32_SW genome assembly, chromosome: I | blastn | 3063 | 368 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 1556411 | 1556411 | PRJNA1126198_P_NODE_4802_length_809_cov_2.254076_g4231_i0 | PRJNA1126198 | 4802 | 809 | 2.254076 | 18.23547484 | Campylobacter devanensis | 3161138 | Bacteria | Bacteria | 305 | 4.28e-100 | NR | WP_086298024.1 | 3161138 | g4231 | i0 | 64.3 | 3.17428924598269 | 213 | 76 | 79 | 0 | 170 | 808 | 4 | 216 | WP_086298024.1 HipA domain-containing protein [Campylobacter devanensis] | diamond | 2568 | 305 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter devanensis | ||
| 1556511 | 1556511 | PRJNA1126198_P_NODE_76402_length_363_cov_1.537931_g75685_i0 | PRJNA1126198 | 76402 | 363 | 1.537931 | 5.58268953 | unclassified Campylobacter | 2593542 | Bacteria | Bacteria | 95.1 | 1.83e-22 | NR | WP_270860818.1 | 2593542 | g75685 | i0 | 60 | 1.87603305785124 | 75 | 30 | 62 | 0 | 358 | 134 | 45 | 119 | WP_270860818.1 MULTISPECIES: c-type cytochrome [unclassified Campylobacter] | diamond | 681 | 95.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 2305669 | 2305669 | PRJNA1126198_P_NODE_326242_length_260_cov_1.245989_g325521_i0 | PRJNA1126198 | 326242 | 260 | 1.245989 | 3.2395714 | unclassified Campylobacter | 2593542 | Bacteria | Bacteria | 162 | 1.1999999999999998e-44 | NR | WP_270864556.1 | 2593542 | g325521 | i0 | 83.5 | 8.91923076923077 | 85 | 14 | 98.1 | 0 | 255 | 1 | 238 | 322 | WP_270864556.1 MULTISPECIES: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG [unclassified Campylobacter] | diamond | 2319 | 162 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 2305805 | 2305805 | PRJNA1126198_P_NODE_443142_length_244_cov_1.766082_g442421_i0 | PRJNA1126198 | 443142 | 244 | 1.766082 | 4.30924008 | Campylobacter | 194 | Bacteria | Bacteria | 108 | 2.88e-27 | NR | MBQ7676221.1 | 205 | g442421 | i0 | 67.9 | 4.95491803278689 | 81 | 26 | 99.6 | 0 | 244 | 2 | 14 | 94 | MBQ7676221.1 ATP-binding cassette domain-containing protein [Campylobacter sp.] | diamond | 1209 | 109 | 0.990825688073395 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 2832231 | 2832231 | PRJNA1126198_P_NODE_386183_length_250_cov_0.881356_g385462_i0 | PRJNA1126198 | 386183 | 250 | 0.881356 | 2.20339 | Campylobacter showae | 204 | Bacteria | Bacteria | 407 | 4.1899999999999994e-109 | NTclustered | gi|1483583565|emb|LT631545.1| | 204 | g385462 | i0 | 96 | 13.216 | 250 | 10 | 100 | 0 | 1 | 250 | 553627 | 553876 | Campylobacter showae strain B32_SW genome assembly, chromosome: I | blastn | 3304 | 407 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 2832534 | 2832534 | PRJNA1126198_P_NODE_61143_length_381_cov_1.402597_g60426_i0 | PRJNA1126198 | 61143 | 381 | 1.402597 | 5.34389457 | Campylobacter | 194 | Bacteria | Bacteria | 207 | 3.16e-63 | NR | WP_171993394.1 | 202 | g60426 | i0 | 85.8 | 16 | 127 | 18 | 100 | 0 | 381 | 1 | 257 | 383 | WP_171993394.1 NifS family cysteine desulfurase [Campylobacter mucosalis] | diamond | 6096 | 208 | 0.995192307692308 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter mucosalis | ||
| 3580832 | 3580832 | PRJNA1126198_P_NODE_217203_length_287_cov_1.457944_g216482_i0 | PRJNA1126198 | 217203 | 287 | 1.457944 | 4.18429928 | Caminibacter | 191301 | Bacteria | Bacteria | 86.1 | 2.62e-12 | NTclustered | gi|1666442357|gb|CP040463.1| | 391592 | g216482 | i0 | 94.643 | 31.4425087108014 | 56 | 1 | 19 | 2 | 234 | 287 | 23242 | 23187 | Caminibacter mediatlanticus TB-2 chromosome, complete genome | blastn | 9024 | 86.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Nautiliales | Nautiliaceae | Caminibacter | Caminibacter mediatlanticus | ||
| 4108245 | 4108245 | PRJNA1126198_P_NODE_205304_length_291_cov_1.155963_g204584_i0 | PRJNA1126198 | 205304 | 291 | 1.155963 | 3.36385233 | Campylobacter vicugnae | 1660076 | Bacteria | Bacteria | 337 | 6.65e-88 | NTclustered | gi|2678412531|gb|CP144916.1| | 1660076 | g204584 | i0 | 88.809 | 255.577319587629 | 277 | 27 | 95 | 4 | 2 | 276 | 82156 | 82430 | Campylobacter vicugnae strain RM9261 chromosome, complete genome | blastn | 74373 | 337 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter vicugnae | ||
| 4108274 | 4108274 | PRJNA1126198_P_NODE_220804_length_286_cov_1.455399_g220083_i0 | PRJNA1126198 | 220804 | 286 | 1.455399 | 4.16244114 | Campylobacter iguaniorum | 1244531 | Bacteria | Bacteria | 182 | 3.23e-41 | NTclustered | gi|971185943|gb|CP010995.1| | 1244531 | g220083 | i0 | 84.324 | 10.2587412587413 | 185 | 29 | 65 | 0 | 31 | 215 | 1364351 | 1364535 | Campylobacter iguaniorum strain 2463D chromosome, complete genome | blastn | 2934 | 182 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter iguaniorum | ||
| 4108714 | 4108714 | PRJNA1126198_P_NODE_440224_length_245_cov_0.889535_g439503_i0 | PRJNA1126198 | 440224 | 245 | 0.889535 | 2.17936075 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g439503 | i0 | 100 | 5.21632653061225 | 245 | 0 | 100 | 0 | 1 | 245 | 175127 | 174883 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 1278 | 453 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 5384798 | 5384798 | PRJNA1126198_P_NODE_409525_length_248_cov_0.874286_g408804_i0 | PRJNA1126198 | 409525 | 248 | 0.874286 | 2.16822928 | Campylobacter concisus | 199 | Bacteria | Bacteria | 453 | 5.2600000000000005e-123 | NTclustered | gi|1938724023|gb|CP060707.1| | 199 | g408804 | i0 | 99.597 | 11.1854838709677 | 248 | 1 | 100 | 0 | 1 | 248 | 1085787 | 1085540 | Campylobacter concisus strain P1CDO2 chromosome, complete genome | blastn | 2774 | 453 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 5384832 | 5384832 | PRJNA1126198_P_NODE_419445_length_247_cov_0.885057_g418724_i0 | PRJNA1126198 | 419445 | 247 | 0.885057 | 2.18609079 | Wolinella succinogenes | 844 | Bacteria | Bacteria | 114 | 1.23e-28 | NR | WP_011139898.1 | 844 | g418724 | i0 | 89.1 | 0.777327935222672 | 64 | 7 | 77.7 | 0 | 2 | 193 | 230 | 293 | WP_011139898.1 glycine--tRNA ligase subunit alpha [Wolinella succinogenes] | diamond | 192 | 114 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Wolinella | Wolinella succinogenes | ||
| 5384897 | 5384897 | PRJNA1126198_P_NODE_443965_length_244_cov_1.491228_g443244_i0 | PRJNA1126198 | 443965 | 244 | 1.491228 | 3.63859632 | Campylobacter concisus | 199 | Bacteria | Bacteria | 363 | 8.949999999999999e-96 | NTclustered | gi|1938721720|gb|CP049266.1| | 199 | g443244 | i0 | 94.142 | 14.2950819672131 | 239 | 13 | 98 | 1 | 1 | 238 | 1379575 | 1379813 | Campylobacter concisus strain P1CDO3 chromosome, complete genome | blastn | 3488 | 363 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 5384952 | 5384952 | PRJNA1126198_P_NODE_465025_length_242_cov_1.591716_g464304_i0 | PRJNA1126198 | 465025 | 242 | 1.591716 | 3.85195272 | Campylobacter corcagiensis | 1448857 | Bacteria | Bacteria | 178 | 3.45e-40 | NTclustered | gi|1847320813|gb|CP053842.1| | 1448857 | g464304 | i0 | 80.169 | 4.34710743801653 | 237 | 47 | 98 | 0 | 4 | 240 | 957518 | 957282 | Campylobacter corcagiensis strain LMG 27932 chromosome, complete genome | blastn | 1052 | 178 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter corcagiensis | ||
| 6659301 | 6659301 | PRJNA1126198_P_NODE_342486_length_256_cov_1.874317_g341765_i0 | PRJNA1126198 | 342486 | 256 | 1.874317 | 4.79825152 | Candidatus Campylobacter infans | 2561898 | Bacteria | Bacteria | 139 | 6.36e-36 | NR | KAF0590077.1 | 2561898 | g341765 | i0 | 80 | 0.99609375 | 85 | 17 | 99.6 | 0 | 255 | 1 | 319 | 403 | KAF0590077.1 MAG: hypothetical protein CGEMS_1373 [Candidatus Campylobacter infans] | diamond | 255 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Candidatus Campylobacter infans | ||
| 6659450 | 6659450 | PRJNA1126198_P_NODE_399066_length_249_cov_0.875000_g398345_i0 | PRJNA1126198 | 399066 | 249 | 0.875 | 2.17875 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 355 | 1.53e-93 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g398345 | i0 | 92.369 | 2.51004016064257 | 249 | 19 | 100 | 0 | 1 | 249 | 1783626 | 1783378 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 625 | 355 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 6659576 | 6659576 | PRJNA1126198_P_NODE_450046_length_244_cov_0.900585_g449325_i0 | PRJNA1126198 | 450046 | 244 | 0.900585 | 2.1974274 | Campylobacter showae | 204 | Bacteria | Bacteria | 363 | 8.949999999999999e-96 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g449325 | i0 | 93.443 | 10.9262295081967 | 244 | 16 | 100 | 0 | 1 | 244 | 203187 | 202944 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 2666 | 363 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 6659726 | 6659726 | PRJNA1126198_P_NODE_63706_length_378_cov_1.016393_g62989_i0 | PRJNA1126198 | 63706 | 378 | 1.016393 | 3.84196554 | Campylobacter | 194 | Bacteria | Bacteria | 200 | 1.0799999999999998e-56 | NR | WP_084107832.1 | 199 | g62989 | i0 | 81.6 | 1.98412698412698 | 125 | 23 | 99.2 | 0 | 2 | 376 | 403 | 527 | WP_084107832.1 restriction endonuclease subunit S [Campylobacter concisus] | diamond | 750 | 200 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 7408177 | 7408177 | PRJNA1126198_P_NODE_27226_length_457_cov_1.434896_g26524_i0 | PRJNA1126198 | 27226 | 457 | 1.434896 | 6.55747472 | Campylobacter | 194 | Bacteria | Bacteria | 196 | 1.87e-61 | NR | MBS6287599.1 | 199 | g26524 | i0 | 76 | 7.14879649890591 | 121 | 29 | 79.4 | 0 | 364 | 2 | 1 | 121 | MBS6287599.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH [Campylobacter concisus] | diamond | 3267 | 197 | 0.99492385786802 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 7934190 | 7934190 | PRJNA1126198_P_NODE_194207_length_294_cov_3.796380_g193487_i0 | PRJNA1126198 | 194207 | 294 | 3.79638 | 11.1613572 | Campylobacter concisus | 199 | Bacteria | Bacteria | 125 | 8.06e-34 | NR | WP_087584819.1 | 199 | g193487 | i0 | 69.7 | 3.8469387755102 | 76 | 23 | 77.6 | 0 | 292 | 65 | 112 | 187 | WP_087584819.1 hypothetical protein [Campylobacter concisus] | diamond | 1131 | 125 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 7934249 | 7934249 | PRJNA1126198_P_NODE_226327_length_284_cov_2.526066_g225606_i0 | PRJNA1126198 | 226327 | 284 | 2.526066 | 7.17402744 | Campylobacter concisus | 199 | Bacteria | Bacteria | 448 | 2.8599999999999995e-121 | NTclustered | gi|1938721720|gb|CP049266.1| | 199 | g225606 | i0 | 95.07 | 3.19014084507042 | 284 | 14 | 100 | 0 | 1 | 284 | 1053406 | 1053689 | Campylobacter concisus strain P1CDO3 chromosome, complete genome | blastn | 906 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 7934423 | 7934423 | PRJNA1126198_P_NODE_314807_length_262_cov_1.650794_g314086_i0 | PRJNA1126198 | 314807 | 262 | 1.650794 | 4.32508028 | Campylobacter concisus | 199 | Bacteria | Bacteria | 267 | 7.84e-67 | NTclustered | gi|2700477995|gb|CP147775.1| | 199 | g314086 | i0 | 85.036 | 4.88167938931298 | 274 | 28 | 100 | 4 | 1 | 262 | 881051 | 881323 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 1279 | 267 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 9209076 | 9209076 | PRJNA1126198_P_NODE_139688_length_318_cov_1.693878_g138969_i0 | PRJNA1126198 | 139688 | 318 | 1.693878 | 5.38653204 | Campylobacter vicugnae | 1660076 | Bacteria | Bacteria | 76.8 | 1.77e-9 | NTclustered | gi|1192708697|gb|CP018791.1| | 1660076 | g138969 | i0 | 80.342 | 8.25786163522013 | 117 | 9 | 36 | 7 | 196 | 310 | 1467126 | 1467230 | Campylobacter vicugnae strain RM8964, complete genome | blastn | 2626 | 76.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter vicugnae | ||
| 9209169 | 9209169 | PRJNA1126198_P_NODE_205348_length_291_cov_1.133028_g204628_i0 | PRJNA1126198 | 205348 | 291 | 1.133028 | 3.29711148 | Campylobacter showae | 204 | Bacteria | Bacteria | 128 | 4.35e-25 | NTclustered | gi|1483583493|emb|LT631417.1| | 204 | g204628 | i0 | 93.258 | 0.611683848797251 | 89 | 3 | 30 | 3 | 113 | 198 | 267460 | 267548 | Campylobacter showae genome assembly, chromosome: I | blastn | 178 | 128 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 9209251 | 9209251 | PRJNA1126198_P_NODE_244048_length_280_cov_0.951691_g243327_i0 | PRJNA1126198 | 244048 | 280 | 0.951691 | 2.6647348 | Campylobacter anatolicus | 2829105 | Bacteria | Bacteria | 138 | 5.49e-37 | NR | WP_212140206.1 | 2829105 | g243327 | i0 | 73.1 | 0.996428571428571 | 93 | 25 | 99.6 | 0 | 280 | 2 | 255 | 347 | WP_212140206.1 aminofutalosine deaminase family hydrolase [Campylobacter anatolicus] | diamond | 279 | 138 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter anatolicus | ||
| 9209283 | 9209283 | PRJNA1126198_P_NODE_261728_length_275_cov_1.430693_g261007_i0 | PRJNA1126198 | 261728 | 275 | 1.430693 | 3.93440575 | Campylobacter showae | 204 | Bacteria | Bacteria | 385 | 2.19e-102 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g261007 | i0 | 92.308 | 11.9490909090909 | 273 | 18 | 99 | 1 | 2 | 274 | 383179 | 383448 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 3286 | 385 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 9209288 | 9209288 | PRJNA1126198_P_NODE_263468_length_274_cov_2.676617_g262747_i0 | PRJNA1126198 | 263468 | 274 | 2.676617 | 7.33393058 | Campylobacter sp. CS_NA3 | 2984142 | Bacteria | Bacteria | 171 | 6.66e-38 | NTclustered | gi|2427057555|gb|CP115609.1| | 2984142 | g262747 | i0 | 78.182 | 4.83211678832117 | 275 | 54 | 99 | 5 | 1 | 272 | 608395 | 608666 | Campylobacter sp. CS_NA3 strain Cs NA3 chromosome | blastn | 1324 | 171 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CS_NA3 | ||
| 9209550 | 9209550 | PRJNA1126198_P_NODE_38548_length_421_cov_2.600575_g37835_i0 | PRJNA1126198 | 38548 | 421 | 2.600575 | 10.94842075 | Campylobacter coli | 195 | Bacteria | Bacteria | 165 | 4.9900000000000003e-36 | NTclustered | gi|2805366594|gb|CP169433.1| | 195 | g37835 | i0 | 77.536 | 20.7173396674584 | 276 | 60 | 65 | 2 | 127 | 401 | 391134 | 390860 | Campylobacter coli strain CVM N17C291 chromosome, complete genome | blastn | 8722 | 165 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 9209557 | 9209557 | PRJNA1126198_P_NODE_387848_length_250_cov_0.875706_g387127_i0 | PRJNA1126198 | 387848 | 250 | 0.875706 | 2.189265 | Campylobacter showae | 204 | Bacteria | Bacteria | 425 | 1.16e-114 | NTclustered | gi|1483583493|emb|LT631417.1| | 204 | g387127 | i0 | 97.581 | 7.788 | 248 | 6 | 99 | 0 | 1 | 248 | 210630 | 210383 | Campylobacter showae genome assembly, chromosome: I | blastn | 1947 | 425 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 9209570 | 9209570 | PRJNA1126198_P_NODE_391248_length_249_cov_1.994318_g390527_i0 | PRJNA1126198 | 391248 | 249 | 1.994318 | 4.96585182 | Candidatus Campylobacter infans | 2561898 | Bacteria | Bacteria | 128 | 1.7599999999999998e-32 | NR | KAF0589999.1 | 2561898 | g390527 | i0 | 85.4 | 0.987951807228916 | 82 | 12 | 98.8 | 0 | 247 | 2 | 352 | 433 | KAF0589999.1 MAG: hypothetical protein CGEMS_1432 [Candidatus Campylobacter infans] | diamond | 246 | 128 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Candidatus Campylobacter infans | ||
| 9209577 | 9209577 | PRJNA1126198_P_NODE_39368_length_419_cov_2.294798_g38654_i0 | PRJNA1126198 | 39368 | 419 | 2.294798 | 9.61520362 | Campylobacter fetus subsp. venerealis cfvi97/532 | 1273270 | Bacteria | Bacteria | 195 | 1.6599999999999995e-55 | NR | OCS21933.1 | 1273270 | g38654 | i0 | 73.2 | 0.988066825775656 | 138 | 37 | 98.8 | 0 | 415 | 2 | 233 | 370 | OCS21933.1 hypothetical protein CFVI97532_06960 [Campylobacter fetus subsp. venerealis cfvi97/532] | diamond | 414 | 195 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter fetus | ||
| 9209620 | 9209620 | PRJNA1126198_P_NODE_406868_length_248_cov_0.891429_g406147_i0 | PRJNA1126198 | 406868 | 248 | 0.891429 | 2.21074392 | Campylobacter rectus | 203 | Bacteria | Bacteria | 398 | 2.5e-106 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g406147 | i0 | 95.582 | 9.03629032258065 | 249 | 10 | 100 | 1 | 1 | 248 | 2404914 | 2404666 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 2241 | 398 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 9209684 | 9209684 | PRJNA1126198_P_NODE_438468_length_245_cov_0.901163_g437747_i0 | PRJNA1126198 | 438468 | 245 | 0.901163 | 2.20784935 | Campylobacter concisus | 199 | Bacteria | Bacteria | 398 | 2.47e-106 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g437747 | i0 | 95.918 | 10.8857142857143 | 245 | 10 | 100 | 0 | 1 | 245 | 772128 | 772372 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 2667 | 398 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 9209827 | 9209827 | PRJNA1126198_P_NODE_51008_length_396_cov_1.851393_g50291_i0 | PRJNA1126198 | 51008 | 396 | 1.851393 | 7.33151628 | Campylobacter upsaliensis | 28080 | Bacteria | Bacteria | 52.8 | 0.038 | NTclustered | gi|2097503849|emb|OU701459.1| | 28080 | g50291 | i0 | 100 | 0.0707070707070707 | 28 | 0 | 7 | 0 | 83 | 110 | 1256270 | 1256297 | Campylobacter upsaliensis strain Campylobacter upsaliensis 17-M197059 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter upsaliensis | ||
| 9209869 | 9209869 | PRJNA1126198_P_NODE_70168_length_370_cov_1.185185_g69451_i0 | PRJNA1126198 | 70168 | 370 | 1.185185 | 4.3851845 | Campylobacter | 194 | Bacteria | Bacteria | 185 | 1.5499999999999996e-55 | NR | WP_009650487.1 | 194 | g69451 | i0 | 69.1 | 1.99459459459459 | 123 | 38 | 99.7 | 0 | 2 | 370 | 135 | 257 | WP_009650487.1 MULTISPECIES: ornithine carbamoyltransferase [Campylobacter] | diamond | 738 | 185 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 9958662 | 9958662 | PRJNA1126198_P_NODE_480788_length_235_cov_2.703704_g480067_i0 | PRJNA1126198 | 480788 | 235 | 2.703704 | 6.3537044 | Campylobacter | 194 | Bacteria | Bacteria | 148 | 2.61e-31 | NTclustered | gi|2844315967|gb|CP172397.1| | 195 | g480067 | i0 | 81.081 | 79.1659574468085 | 185 | 35 | 79 | 0 | 2 | 186 | 634049 | 633865 | Campylobacter coli strain YH506 chromosome, complete genome | blastn | 18604 | 148 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 10484533 | 10484533 | PRJNA1126198_P_NODE_103529_length_340_cov_1.389513_g102810_i0 | PRJNA1126198 | 103529 | 340 | 1.389513 | 4.7243442 | Campylobacter | 194 | Bacteria | Bacteria | 212 | 3.97e-66 | NR | MBR2163836.1 | 205 | g102810 | i0 | 90.3 | 2.99117647058824 | 113 | 11 | 99.7 | 0 | 340 | 2 | 53 | 165 | MBR2163836.1 cbb3-type cytochrome c oxidase subunit I [Campylobacter sp.] | diamond | 1017 | 214 | 0.990654205607477 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 10484592 | 10484592 | PRJNA1126198_P_NODE_141869_length_317_cov_1.454918_g141150_i0 | PRJNA1126198 | 141869 | 317 | 1.454918 | 4.61209006 | Campylobacter sputorum | 206 | Bacteria | Bacteria | 143 | 1.71e-29 | NTclustered | gi|1216707923|gb|CP019685.1| | 1660072 | g141150 | i0 | 100 | 26.0283911671924 | 77 | 0 | 24 | 0 | 18 | 94 | 1167780 | 1167704 | Campylobacter sputorum subsp. bovis strain RM8705, complete genome | blastn | 8251 | 143 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sputorum | ||
| 10484686 | 10484686 | PRJNA1126198_P_NODE_195809_length_294_cov_1.398190_g195089_i0 | PRJNA1126198 | 195809 | 294 | 1.39819 | 4.1106786 | Campylobacter sp. | 205 | Bacteria | Bacteria | 142 | 1.85e-39 | NR | MBQ9876349.1 | 205 | g195089 | i0 | 71.1 | 8.89795918367347 | 97 | 28 | 99 | 0 | 3 | 293 | 154 | 250 | MBQ9876349.1 iron ABC transporter permease [Campylobacter sp.] | diamond | 2616 | 142 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 10484994 | 10484994 | PRJNA1126198_P_NODE_348169_length_255_cov_1.692308_g347448_i0 | PRJNA1126198 | 348169 | 255 | 1.692308 | 4.3153854 | Campylobacter showae | 204 | Bacteria | Bacteria | 337 | 5.709999999999998e-88 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g347448 | i0 | 92.083 | 2.82352941176471 | 240 | 17 | 94 | 2 | 11 | 249 | 161762 | 162000 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 720 | 337 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 10485132 | 10485132 | PRJNA1126198_P_NODE_406049_length_248_cov_0.891429_g405328_i0 | PRJNA1126198 | 406049 | 248 | 0.891429 | 2.21074392 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 342 | 1.1899999999999999e-89 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g405328 | i0 | 91.532 | 2 | 248 | 21 | 100 | 0 | 1 | 248 | 1891590 | 1891837 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 496 | 342 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 10485156 | 10485156 | PRJNA1126198_P_NODE_417709_length_247_cov_0.890805_g416988_i0 | PRJNA1126198 | 417709 | 247 | 0.890805 | 2.20028835 | Campylobacter rectus | 203 | Bacteria | Bacteria | 340 | 4.25e-89 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g416988 | i0 | 94.17 | 9.69635627530364 | 223 | 13 | 90 | 0 | 3 | 225 | 2418498 | 2418276 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 2395 | 340 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 11760147 | 11760147 | PRJNA1126198_P_NODE_374890_length_251_cov_1.314607_g374169_i0 | PRJNA1126198 | 374890 | 251 | 1.314607 | 3.29966357 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 125 | 2.27e-31 | NR | WP_024962819.1 | 827 | g374169 | i0 | 69.9 | 1.9840637450199201 | 83 | 25 | 99.2 | 0 | 3 | 251 | 207 | 289 | WP_024962819.1 RelA/SpoT family protein [Campylobacter ureolyticus] | diamond | 498 | 125 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 11760349 | 11760349 | PRJNA1126198_P_NODE_458130_length_243_cov_0.917647_g457409_i0 | PRJNA1126198 | 458130 | 243 | 0.917647 | 2.22988221 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g457409 | i0 | 99.588 | 6.01646090534979 | 243 | 1 | 100 | 0 | 1 | 243 | 575210 | 574968 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 1462 | 444 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 11760427 | 11760427 | PRJNA1126198_P_NODE_49510_length_399_cov_1.352761_g48793_i0 | PRJNA1126198 | 49510 | 399 | 1.352761 | 5.39751639 | Campylobacter | 194 | Bacteria | Bacteria | 204 | 6.669999999999999e-60 | NR | MBR6611437.1 | 205 | g48793 | i0 | 73.5 | 4.96240601503759 | 132 | 35 | 99.2 | 0 | 396 | 1 | 204 | 335 | MBR6611437.1 excinuclease ABC subunit UvrA [Campylobacter sp.] | diamond | 1980 | 204 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 13034988 | 13034988 | PRJNA1126198_P_NODE_243131_length_280_cov_1.241546_g242410_i0 | PRJNA1126198 | 243131 | 280 | 1.241546 | 3.4763288 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 425 | 1.32e-114 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g242410 | i0 | 94.245 | 1.98571428571429 | 278 | 16 | 99 | 0 | 1 | 278 | 398971 | 398694 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 556 | 425 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 13035369 | 13035369 | PRJNA1126198_P_NODE_425651_length_246_cov_0.901734_g424930_i0 | PRJNA1126198 | 425651 | 246 | 0.901734 | 2.21826564 | Campylobacter showae | 204 | Bacteria | Bacteria | 361 | 3.25e-95 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g424930 | i0 | 93.089 | 11.9471544715447 | 246 | 17 | 100 | 0 | 1 | 246 | 761745 | 761990 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 2939 | 361 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 13035456 | 13035456 | PRJNA1126198_P_NODE_459831_length_243_cov_0.911765_g459110_i0 | PRJNA1126198 | 459831 | 243 | 0.911765 | 2.21558895 | Campylobacter geochelonis | 1780362 | Bacteria | Bacteria | 204 | 5.71e-48 | NTclustered | gi|1847322497|gb|CP053844.1| | 1780362 | g459110 | i0 | 82.609 | 1.43621399176955 | 230 | 40 | 95 | 0 | 7 | 236 | 2044439 | 2044210 | Campylobacter geochelonis strain LMG 29375 chromosome, complete genome | blastn | 349 | 204 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter geochelonis | ||
| 13035458 | 13035458 | PRJNA1126198_P_NODE_460231_length_243_cov_0.911765_g459510_i0 | PRJNA1126198 | 460231 | 243 | 0.911765 | 2.21558895 | Campylobacter concisus | 199 | Bacteria | Bacteria | 433 | 6.69e-117 | NTclustered | gi|1938717787|gb|CP060705.1| | 199 | g459510 | i0 | 98.765 | 9 | 243 | 3 | 100 | 0 | 1 | 243 | 1003558 | 1003316 | Campylobacter concisus strain P13UCO-S1 chromosome, complete genome | blastn | 2187 | 433 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 13035494 | 13035494 | PRJNA1126198_P_NODE_470751_length_242_cov_0.917160_g470030_i0 | PRJNA1126198 | 470751 | 242 | 0.91716 | 2.2195272 | Campylobacter showae | 204 | Bacteria | Bacteria | 387 | 5.26e-103 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g470030 | i0 | 95.455 | 14.9504132231405 | 242 | 11 | 100 | 0 | 1 | 242 | 112285 | 112526 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 3618 | 387 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 13783462 | 13783462 | PRJNA1126198_P_NODE_120111_length_329_cov_1.515625_g119392_i0 | PRJNA1126198 | 120111 | 329 | 1.515625 | 4.98640625 | Campylobacter | 194 | Bacteria | Bacteria | 305 | 2.15e-78 | NTclustered | gi|827023298|gb|CP011372.1| | 201 | g119392 | i0 | 84.345 | 94.5896656534954 | 313 | 47 | 95 | 2 | 1 | 312 | 425733 | 426044 | Campylobacter lari strain Slaughter Beach, complete genome | blastn | 31120 | 305 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter lari | ||
| 13783694 | 13783694 | PRJNA1126198_P_NODE_351_length_3314_cov_6.451712_g285_i0 | PRJNA1126198 | 351 | 3314 | 6.451712 | 213.80973568 | Campylobacter | 194 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|1356705543|gb|CP027403.1| | 32021 | g285 | i0 | 91.313 | 18.1608328304164 | 518 | 44 | 36 | 1 | 1825 | 2341 | 481071 | 480554 | Campylobacter jejuni subsp. doylei strain FDAARGOS_295 chromosome, complete genome | blastn | 60185 | 706 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 14310355 | 14310355 | PRJNA1126198_P_NODE_338252_length_257_cov_1.684783_g337531_i0 | PRJNA1126198 | 338252 | 257 | 1.684783 | 4.32989231 | Campylobacter sp. RM16192 | 1660080 | Bacteria | Bacteria | 154 | 6.23e-33 | NTclustered | gi|1622751281|gb|CP012552.1| | 1660080 | g337531 | i0 | 91.304 | 80.4241245136187 | 115 | 6 | 44 | 4 | 125 | 237 | 118252 | 118140 | Campylobacter sp. RM16192 chromosome, complete genome | blastn | 20669 | 154 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM16192 | ||
| 14310373 | 14310373 | PRJNA1126198_P_NODE_348272_length_255_cov_1.686813_g347551_i0 | PRJNA1126198 | 348272 | 255 | 1.686813 | 4.30137315 | Campylobacter | 194 | Bacteria | Bacteria | 113 | 3.17e-29 | NR | WP_075494918.1 | 1780362 | g347551 | i0 | 68.3 | 1.92941176470588 | 82 | 26 | 96.5 | 0 | 253 | 8 | 108 | 189 | WP_075494918.1 ribosome biogenesis GTP-binding protein YihA/YsxC [Campylobacter geochelonis] | diamond | 492 | 114 | 0.991228070175439 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter geochelonis | ||
| 14310475 | 14310475 | PRJNA1126198_P_NODE_389732_length_250_cov_0.870056_g389011_i0 | PRJNA1126198 | 389732 | 250 | 0.870056 | 2.17514 | Campylobacter sp. CCUG 57310 | 2517362 | Bacteria | Bacteria | 303 | 5.66e-78 | NTclustered | gi|1847337518|gb|CP053845.1| | 2517362 | g389011 | i0 | 88.538 | 1.012 | 253 | 26 | 100 | 3 | 1 | 250 | 347277 | 347025 | Campylobacter sp. CCUG 57310 chromosome, complete genome | blastn | 253 | 303 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CCUG 57310 | ||
| 14310587 | 14310587 | PRJNA1126198_P_NODE_440532_length_245_cov_0.883721_g439811_i0 | PRJNA1126198 | 440532 | 245 | 0.883721 | 2.16511645 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 392 | 1.15e-104 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g439811 | i0 | 95.51 | 11.9755102040816 | 245 | 11 | 100 | 0 | 1 | 245 | 549440 | 549196 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 2934 | 392 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 14310816 | 14310816 | PRJNA1126198_P_NODE_96952_length_345_cov_1.147059_g96234_i0 | PRJNA1126198 | 96952 | 345 | 1.147059 | 3.95735355 | Campylobacter | 194 | Bacteria | Bacteria | 208 | 2.7499999999999998e-67 | NR | MBQ7675462.1 | 205 | g96234 | i0 | 93.9 | 11.895652173913 | 114 | 7 | 99.1 | 0 | 3 | 344 | 1 | 114 | MBQ7675462.1 peptide chain release factor 1 [Campylobacter sp.] | diamond | 4104 | 208 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 15584187 | 15584187 | PRJNA1126198_P_NODE_245213_length_279_cov_1.791262_g244492_i0 | PRJNA1126198 | 245213 | 279 | 1.791262 | 4.99762098 | Campylobacter | 194 | Bacteria | Bacteria | 123 | 1.7299999999999998e-31 | NR | WP_316370829.1 | 194 | g244492 | i0 | 67.8 | 13.3225806451613 | 87 | 28 | 93.5 | 0 | 269 | 9 | 99 | 185 | WP_316370829.1 MULTISPECIES: tRNA pseudouridine(13) synthase TruD [Campylobacter] | diamond | 3717 | 123 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 15584320 | 15584320 | PRJNA1126198_P_NODE_319273_length_261_cov_1.702128_g318552_i0 | PRJNA1126198 | 319273 | 261 | 1.702128 | 4.44255408 | Campylobacter | 194 | Bacteria | Bacteria | 135 | 1.14e-35 | NR | NLY03305.1 | 205 | g318552 | i0 | 83.5 | 15.448275862069 | 85 | 14 | 97.7 | 0 | 2 | 256 | 318 | 402 | NLY03305.1 replicative DNA helicase [Campylobacter sp.] | diamond | 4032 | 135 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 15584748 | 15584748 | PRJNA1126198_P_NODE_52393_length_394_cov_1.439252_g51676_i0 | PRJNA1126198 | 52393 | 394 | 1.439252 | 5.67065288 | Campylobacter sp. JMF_ | 205 | Bacteria | Bacteria | 152 | 5.999999999999999e-45 | NR | WP_270871206.1 | 2983823 | g51676 | i0 | 85.1 | 0.66243654822335 | 87 | 13 | 66.2 | 0 | 392 | 132 | 41 | 127 | WP_270871206.1 DUF7674 family protein [Campylobacter sp. JMF_06 NA1] | diamond | 261 | 152 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. JMF_06 NA1 | ||
| 16332761 | 16332761 | PRJNA1126198_P_NODE_310833_length_263_cov_1.631579_g310112_i0 | PRJNA1126198 | 310833 | 263 | 1.631579 | 4.29105277 | Campylobacter | 194 | Bacteria | Bacteria | 425 | 1.2299999999999999e-114 | NTclustered | gi|1376251231|gb|CP021642.1| | 199 | g310112 | i0 | 95.817 | 15.9695817490494 | 263 | 11 | 100 | 0 | 1 | 263 | 1948884 | 1949146 | Campylobacter concisus strain P2CDO4 chromosome, complete genome | blastn | 4200 | 425 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 16332781 | 16332781 | PRJNA1126198_P_NODE_32913_length_437_cov_2.582418_g32204_i0 | PRJNA1126198 | 32913 | 437 | 2.582418 | 11.28516666 | Campylobacter | 194 | Bacteria | Bacteria | 403 | 1.0099999999999999e-107 | NTclustered | gi|2524037737|dbj|AP028410.1| | 195 | g32204 | i0 | 83.834 | 99.649885583524 | 433 | 60 | 98 | 9 | 1 | 428 | 21927 | 21500 | Campylobacter coli IDH-11999 plasmid pTet_IDH-11999 DNA, complete sequence | blastn | 43547 | 403 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 16858261 | 16858261 | PRJNA1126198_P_NODE_113754_length_333_cov_1.484615_g113035_i0 | PRJNA1126198 | 113754 | 333 | 1.484615 | 4.94376795 | Campylobacter ureolyticus RIGS 988 | 827 | Bacteria | Bacteria | 116 | 2.76e-28 | NR | AKT89890.1 | 1032069 | g113035 | i0 | 83.8 | 2.45045045045045 | 68 | 11 | 61.3 | 0 | 130 | 333 | 1 | 68 | AKT89890.1 HD family hydrolase, possible ComGF family competence protein [Campylobacter ureolyticus RIGS 9880] | diamond | 816 | 116 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 16859003 | 16859003 | PRJNA1126198_P_NODE_470394_length_242_cov_0.917160_g469673_i0 | PRJNA1126198 | 470394 | 242 | 0.91716 | 2.2195272 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 405 | 1.45e-108 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g469673 | i0 | 97.083 | 1.98347107438017 | 240 | 7 | 99 | 0 | 1 | 240 | 153738 | 153499 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 480 | 405 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 16859014 | 16859014 | PRJNA1126198_P_NODE_4734_length_816_cov_2.799462_g4166_i0 | PRJNA1126198 | 4734 | 816 | 2.799462 | 22.84360992 | Campylobacter coli | 195 | Bacteria | Bacteria | 501 | 6.78e-137 | NTclustered | gi|2806435457|gb|CP169451.1| | 195 | g4166 | i0 | 78.626 | 61.9166666666667 | 786 | 146 | 95 | 19 | 19 | 793 | 1265966 | 1266740 | Campylobacter coli strain CVM N17C440 chromosome, complete genome | blastn | 50524 | 501 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 16859030 | 16859030 | PRJNA1126198_P_NODE_483394_length_233_cov_2.737500_g482673_i0 | PRJNA1126198 | 483394 | 233 | 2.7375 | 6.378375 | Campylobacteraceae bacterium | 2268179 | Bacteria | Bacteria | 109 | 3.07e-28 | NR | NLK67178.1 | 2268179 | g482673 | i0 | 71.8 | 0.914163090128755 | 71 | 20 | 91.4 | 0 | 233 | 21 | 64 | 134 | NLK67178.1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [Campylobacteraceae bacterium] | diamond | 213 | 109 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacteraceae bacterium | |||
| 17607926 | 17607926 | PRJNA1126198_P_NODE_210894_length_289_cov_1.435185_g210173_i0 | PRJNA1126198 | 210894 | 289 | 1.435185 | 4.14768465 | root | 1 | Root_unresolved | Root_unresolved | 534 | 2.18e-147 | NTclustered | gi|1969424192|gb|MW548691.1| | 199 | g210173 | i0 | 100 | 102 | 289 | 0 | 100 | 0 | 1 | 289 | 389 | 677 | Campylobacter concisus strain KCOM 3603 (=ChDC ETd4) 16S ribosomal RNA gene, partial sequence | blastn | 29478 | 534 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 17608166 | 17608166 | PRJNA1126198_P_NODE_460574_length_243_cov_0.905882_g459853_i0 | PRJNA1126198 | 460574 | 243 | 0.905882 | 2.20129326 | root | 1 | Root_unresolved | Root_unresolved | 449 | 6.65e-122 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g459853 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 698794 | 698552 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 18132820 | 18132820 | PRJNA1126198_P_NODE_133295_length_322_cov_0.931727_g132576_i0 | PRJNA1126198 | 133295 | 322 | 0.931727 | 3.00016094 | Campylobacter hominis | 76517 | Bacteria | Bacteria | 177 | 3.0299999999999993e-52 | NR | WP_012108685.1 | 76517 | g132576 | i0 | 75.7 | 1.99378881987578 | 107 | 26 | 99.7 | 0 | 321 | 1 | 25 | 131 | WP_012108685.1 aminofutalosine synthase MqnE [Campylobacter hominis] | diamond | 642 | 177 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 18132913 | 18132913 | PRJNA1126198_P_NODE_20115_length_492_cov_1.835322_g19419_i0 | PRJNA1126198 | 20115 | 492 | 1.835322 | 9.02978424 | Campylobacter | 194 | Bacteria | Bacteria | 96.7 | 6.19e-20 | NR | WP_122871593.1 | 204 | g19419 | i0 | 75.4 | 1.39024390243902 | 57 | 14 | 34.8 | 0 | 173 | 3 | 1 | 57 | WP_122871593.1 pyruvate kinase [Campylobacter showae] | diamond | 684 | 96.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 18133001 | 18133001 | PRJNA1126198_P_NODE_253915_length_277_cov_1.406863_g253194_i0 | PRJNA1126198 | 253915 | 277 | 1.406863 | 3.89701051 | Arcobacter roscoffensis | 2961520 | Bacteria | Bacteria | 484 | 2.1199999999999996e-132 | NTclustered | gi|2270258285|gb|CP100595.1| | 2961520 | g253194 | i0 | 98.195 | 85.7220216606498 | 277 | 5 | 100 | 0 | 1 | 277 | 2186207 | 2186483 | Arcobacter roscoffensis strain ARW1-2F2 chromosome, complete genome | blastn | 23745 | 484 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter roscoffensis | ||
| 18133252 | 18133252 | PRJNA1126198_P_NODE_37275_length_425_cov_1.315341_g36564_i0 | PRJNA1126198 | 37275 | 425 | 1.315341 | 5.59019925 | unclassified Campylobacter | 2593542 | Bacteria | Bacteria | 153 | 9.559999999999998e-42 | NR | WP_270862267.1 | 2593542 | g36564 | i0 | 60.7 | 0.988235294117647 | 140 | 33 | 98.8 | 2 | 5 | 424 | 283 | 400 | WP_270862267.1 MULTISPECIES: 3-phosphoshikimate 1-carboxyvinyltransferase [unclassified Campylobacter] | diamond | 420 | 153 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 18133475 | 18133475 | PRJNA1126198_P_NODE_460895_length_243_cov_0.905882_g460174_i0 | PRJNA1126198 | 460895 | 243 | 0.905882 | 2.20129326 | Campylobacter rectus | 203 | Bacteria | Bacteria | 399 | 6.789999999999999e-107 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g460174 | i0 | 96.296 | 5 | 243 | 9 | 100 | 0 | 1 | 243 | 2478992 | 2479234 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 1215 | 399 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 18133577 | 18133577 | PRJNA1126198_P_NODE_53595_length_392_cov_1.454545_g52878_i0 | PRJNA1126198 | 53595 | 392 | 1.454545 | 5.7018164 | Campylobacter geochelonis | 1780362 | Bacteria | Bacteria | 370 | 9.11e-98 | NTclustered | gi|1847322497|gb|CP053844.1| | 1780362 | g52878 | i0 | 83.756 | 27.765306122449 | 394 | 60 | 100 | 4 | 1 | 392 | 1799443 | 1799834 | Campylobacter geochelonis strain LMG 29375 chromosome, complete genome | blastn | 10884 | 370 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter geochelonis | ||
| 19407006 | 19407006 | PRJNA1126198_P_NODE_155916_length_310_cov_1.721519_g155197_i0 | PRJNA1126198 | 155916 | 310 | 1.721519 | 5.3367089 | Campylobacter concisus | 199 | Bacteria | Bacteria | 401 | 2.4999999999999992e-107 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g155197 | i0 | 90.323 | 1 | 310 | 25 | 99 | 4 | 1 | 307 | 807584 | 807277 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 310 | 401 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 19407319 | 19407319 | PRJNA1126198_P_NODE_324276_length_260_cov_1.657754_g323555_i0 | PRJNA1126198 | 324276 | 260 | 1.657754 | 4.3101604 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 99.8 | 1.66e-23 | NR | WP_016646313.1 | 827 | g323555 | i0 | 63.2 | 0.876923076923077 | 76 | 27 | 87.7 | 1 | 33 | 260 | 1 | 75 | WP_016646313.1 4-hydroxy-tetrahydrodipicolinate reductase [Campylobacter ureolyticus] | diamond | 228 | 99.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 19407469 | 19407469 | PRJNA1126198_P_NODE_396616_length_249_cov_0.886364_g395895_i0 | PRJNA1126198 | 396616 | 249 | 0.886364 | 2.20704636 | Campylobacter curvus | 200 | Bacteria | Bacteria | 235 | 2.08e-57 | NTclustered | gi|1861373391|gb|CP053826.1| | 200 | g395895 | i0 | 97.122 | 1.67068273092369 | 139 | 4 | 56 | 0 | 111 | 249 | 545819 | 545681 | Campylobacter curvus strain ATCC 35224 chromosome, complete genome | blastn | 416 | 235 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter curvus | ||
| 19407685 | 19407685 | PRJNA1126198_P_NODE_490436_length_228_cov_2.477419_g489715_i0 | PRJNA1126198 | 490436 | 228 | 2.477419 | 5.64851532 | Campylobacter sp. CN_NE2 | 2984146 | Bacteria | Bacteria | 268 | 1.85e-67 | NTclustered | gi|2427059240|gb|CP115608.1| | 2984146 | g489715 | i0 | 88.393 | 76.859649122807 | 224 | 24 | 98 | 1 | 5 | 228 | 226805 | 226584 | Campylobacter sp. CN_NE2 strain Cn NE2 chromosome | blastn | 17524 | 268 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CN_NE2 | ||
| 19407750 | 19407750 | PRJNA1126198_P_NODE_6916_length_679_cov_2.310231_g6272_i0 | PRJNA1126198 | 6916 | 679 | 2.310231 | 15.68646849 | Campylobacter sp. RM16187 | 1660063 | Bacteria | Bacteria | 288 | 8.61e-86 | NR | WP_260953218.1 | 1660063 | g6272 | i0 | 60.8 | 6.22091310751105 | 232 | 85 | 99.9 | 1 | 2 | 679 | 1712 | 1943 | WP_260953218.1 SNF2-related protein [Campylobacter sp. RM16187] | diamond | 4224 | 288 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM16187 | ||
| 20156540 | 20156540 | PRJNA1126198_P_NODE_116996_length_331_cov_1.449612_g116277_i0 | PRJNA1126198 | 116996 | 331 | 1.449612 | 4.79821572 | Candidatus Campylobacter infans | 2561898 | Bacteria | Bacteria | 89.7 | 6.02e-21 | NR | KAF0590070.1 | 2561898 | g116277 | i0 | 74.2 | 0.561933534743202 | 62 | 16 | 56.2 | 0 | 144 | 329 | 1 | 62 | KAF0590070.1 MAG: hypothetical protein CGEMS_1366 [Candidatus Campylobacter infans] | diamond | 186 | 89.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Candidatus Campylobacter infans | ||
| 20156832 | 20156832 | PRJNA1126198_P_NODE_404436_length_248_cov_1.314286_g403715_i0 | PRJNA1126198 | 404436 | 248 | 1.314286 | 3.25942928 | Campylobacter | 194 | Bacteria | Bacteria | 99 | 2.84e-16 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g403715 | i0 | 91.892 | 74.5967741935484 | 74 | 1 | 28 | 1 | 20 | 88 | 40645 | 40718 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 18500 | 99 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 20682535 | 20682535 | PRJNA1126198_P_NODE_127057_length_325_cov_1.515873_g126338_i0 | PRJNA1126198 | 127057 | 325 | 1.515873 | 4.92658725 | Campylobacter rectus | 203 | Bacteria | Bacteria | 484 | 2.5399999999999993e-132 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g126338 | i0 | 93.789 | 5.88307692307692 | 322 | 20 | 99 | 0 | 4 | 325 | 2265971 | 2265650 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 1912 | 484 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 20682701 | 20682701 | PRJNA1126198_P_NODE_231617_length_283_cov_1.466667_g230896_i0 | PRJNA1126198 | 231617 | 283 | 1.466667 | 4.15066761 | Campylobacter concisus | 199 | Bacteria | Bacteria | 479 | 1.01e-130 | NTclustered | gi|1935893765|gb|CP049234.1| | 199 | g230896 | i0 | 97.173 | 12.0212014134276 | 283 | 8 | 100 | 0 | 1 | 283 | 1767589 | 1767871 | Campylobacter concisus strain P15UCO-S2 chromosome, complete genome | blastn | 3402 | 479 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20682997 | 20682997 | PRJNA1126198_P_NODE_370537_length_252_cov_0.865922_g369816_i0 | PRJNA1126198 | 370537 | 252 | 0.865922 | 2.18212344 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 107 | 9.54e-25 | NR | WP_016647402.1 | 827 | g369816 | i0 | 60.7 | 2 | 84 | 32 | 98.8 | 1 | 250 | 2 | 429 | 512 | WP_016647402.1 transglycosylase domain-containing protein [Campylobacter ureolyticus] | diamond | 504 | 107 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 20683016 | 20683016 | PRJNA1126198_P_NODE_380357_length_251_cov_0.865169_g379636_i0 | PRJNA1126198 | 380357 | 251 | 0.865169 | 2.17157419 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 396 | 9.119999999999996e-106 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g379636 | i0 | 95.219 | 2 | 251 | 11 | 100 | 1 | 1 | 251 | 2161660 | 2161909 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 502 | 396 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 20683061 | 20683061 | PRJNA1126198_P_NODE_396177_length_249_cov_0.886364_g395456_i0 | PRJNA1126198 | 396177 | 249 | 0.886364 | 2.20704636 | Campylobacter showae | 204 | Bacteria | Bacteria | 411 | 3.2299999999999996e-110 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g395456 | i0 | 96.386 | 7.98393574297189 | 249 | 9 | 100 | 0 | 1 | 249 | 16886 | 16638 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 1988 | 411 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 20683067 | 20683067 | PRJNA1126198_P_NODE_396997_length_249_cov_0.886364_g396276_i0 | PRJNA1126198 | 396997 | 249 | 0.886364 | 2.20704636 | Campylobacter rectus | 203 | Bacteria | Bacteria | 231 | 2.7e-56 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g396276 | i0 | 83.922 | 20.1164658634538 | 255 | 28 | 98 | 7 | 6 | 249 | 877463 | 877211 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 5009 | 231 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 20683147 | 20683147 | PRJNA1126198_P_NODE_42377_length_413_cov_1.144118_g41660_i0 | PRJNA1126198 | 42377 | 413 | 1.144118 | 4.72520734 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 333 | 1.2700000000000001e-86 | NTclustered | gi|2076403051|gb|CP059375.1| | 197 | g41660 | i0 | 81.465 | 11.452784503632 | 437 | 53 | 100 | 16 | 1 | 413 | 839702 | 840134 | Campylobacter jejuni strain 2012D-9520 chromosome, complete genome | blastn | 4730 | 333 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;