RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1126198" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126198 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29123244 29123244 PRJNA1126198_P_NODE_440189_length_245_cov_0.889535_g439468_i0 PRJNA1126198 440189 245 0.889535 2.17936075 Natronogracilivirga saccharolytica 2812953 Bacteria Bacteria 93.6 3.850000000000001e-21   NR WP_210511117.1 2812953 g439468 i0 80.3 0.746938775510204 61 12 74.7 0 2 184 174 234 WP_210511117.1 MotA/TolQ/ExbB proton channel family protein [Natronogracilivirga saccharolytica] diamond 183 93.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Natronogracilivirga Natronogracilivirga saccharolytica
29659265 29659265 PRJNA1126198_P_NODE_194830_length_294_cov_1.936652_g194110_i0 PRJNA1126198 194830 294 1.936652 5.69375688 Aliifodinibius salipaludis 2032627 Bacteria Bacteria 108 1.4500000000000002e-27   NR WP_095605619.1 2032627 g194110 i0 100 0.510204081632653 50 0 51 0 3 152 131 180 WP_095605619.1 RNA 2'-phosphotransferase [Aliifodinibius salipaludis] diamond 150 108 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius salipaludis
29817412 29817412 PRJNA1126198_P_NODE_487211_length_230_cov_2.980892_g486490_i0 PRJNA1126198 487211 230 2.980892 6.8560516 Gracilimonas halophila 1834464 Bacteria Bacteria 120 2.12e-30   NR WP_390298284.1 1834464 g486490 i0 73 0.965217391304348 74 20 96.5 0 230 9 361 434 WP_390298284.1 fumarylacetoacetase [Gracilimonas halophila] diamond 222 120 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas halophila
30164853 30164853 PRJNA1126198_P_NODE_338392_length_257_cov_1.684783_g337671_i0 PRJNA1126198 338392 257 1.684783 4.32989231 Balneolales bacterium 2497613 Bacteria Bacteria 122 3.64e-32   NR HKI47525.1 2497613 g337671 i0 68.3 0.957198443579767 82 26 95.7 0 8 253 23 104 HKI47525.1 GntR family transcriptional regulator [Balneolales bacterium] diamond 246 122 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;