RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1126198" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1126198 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9209563 9209563 PRJNA1126198_P_NODE_38968_length_420_cov_2.997118_g38255_i0 PRJNA1126198 38968 420 2.997118 12.5878956 Crogonang virus 58 3063050 Viruses Viruses 176 2.3e-39   NTclustered gi|2626079542|gb|OR270365.1| 3063050 g38255 i0 80.342 0.557142857142857 234 44 55 2 1 233 233 1 MAG: Crogonang virus 58 isolate CGH03 genomic sequence blastn 234 176 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 58
23233492 23233492 PRJNA1126198_P_NODE_186199_length_298_cov_0.902222_g185479_i0 PRJNA1126198 186199 298 0.902222 2.68862156 Parecho-like virus 1247839 Viruses Viruses 52.8 0.028   NTclustered gi|2196303787|gb|MZ679274.1| 1247839 g185479 i0 100 0.0939597315436242 28 0 9 0 40 67 6437 6464 MAG: polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Parecho-like virus
26817307 26817307 PRJNA1126198_P_NODE_87041_length_353_cov_1.350000_g86323_i0 PRJNA1126198 87041 353 1.35 4.7655 Sjack associated botourmia-like virus 15 3066740 Viruses Viruses 141 3.2400000000000004e-36   NR WPR16981.1 3066740 g86323 i0 63.2 0.994334277620397 117 33 99.4 2 353 3 335 441 WPR16981.1 MAG: RNA-dependent RNA polymerase [Sjack associated botourmia-like virus 15] diamond 351 141 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Sjack associated botourmia-like virus 15
27734002 27734002 PRJNA1126198_P_NODE_458584_length_243_cov_0.917647_g457863_i0 PRJNA1126198 458584 243 0.917647 2.22988221 Sea turtle neural virus 1 3112944 Viruses Viruses 46.6 0.00158   NR WET19891.1 3112944 g457863 i0 58.8 0.419753086419753 34 14 42 0 241 140 464 497 WET19891.1 MAG: nucleoprotein [Sea turtle neural virus 1] diamond 102 46.6 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Sea turtle neural virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;