RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1126198", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1126198 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18133014 18133014 PRJNA1126198_P_NODE_26435_length_460_cov_1.785530_g25733_i0 PRJNA1126198 26435 460 1.78553 8.213438 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.045   NTclustered gi|687572767|emb|LK586392.1| 57078 g25733 i0 100 0.0608695652173913 28 0 6 0 263 290 337 310 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0178600 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
28606824 28606824 PRJNA1126198_P_NODE_493147_length_227_cov_2.012987_g492425_i0 PRJNA1126198 493147 227 2.012987 4.56948049 Schistosoma 6181 Platyhelminthes Platyhelminthes 44.7 0.00461   NR VDO77126.1 6186 g492425 i0 38.9 1.90308370044053 72 38 93.8 2 15 227 24 90 VDO77126.1 unnamed protein product [Schistosoma curassoni] diamond 432 44.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma curassoni
31397625 31397625 PRJNA1126198_P_NODE_358576_length_253_cov_1.550000_g357855_i0 PRJNA1126198 358576 253 1.55 3.9215 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 55.8 1.02e-6   NR XP_018655320.1 6183 g357855 i0 42.9 1.82608695652174 77 40 86.6 1 35 253 276 352 XP_018655320.1 pescadillo-related [Schistosoma mansoni] diamond 462 55.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;