RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1126198" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA1126198 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26616162 26616162 PRJNA1126198_P_NODE_462121_length_242_cov_3.124260_g461400_i0 PRJNA1126198 462121 242 3.12426 7.5607092 Orthopoxvirus 10242 Viruses Viruses 162 1.6e-48   NR ATB55171.1 10243 g461400 i0 100 28.400826446281 79 0 97.9 0 5 241 1 79 ATB55171.1 CPXV129 protein [Cowpox virus] diamond 6873 162 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus cowpox
28385830 28385830 PRJNA1126198_P_NODE_483926_length_233_cov_2.293750_g483205_i0 PRJNA1126198 483926 233 2.29375 5.3444375 Viruses 10239 Viruses Viruses 74.7 1.79e-13   NR QIG59400.1 2704068 g483205 i0 55.8 1.98283261802575 77 26 97.9 3 231 4 220 289 QIG59400.1 putative cysteine protease [Dishui Lake virophage 5] diamond 462 74.7 1 Viruses   Bamfordvirae Preplasmiviricota Virophaviricetes Priklausovirales Lavidaviridae   Dishui Lake virophage 5
29459061 29459061 PRJNA1126198_P_NODE_429770_length_246_cov_0.890173_g429049_i0 PRJNA1126198 429770 246 0.890173 2.18982558 Orthopoxvirus 10242 Viruses Viruses 162 3.76e-44   NR XEX02893.1 10244 g429049 i0 98.8 48.3780487804878 81 1 98.8 0 244 2 318 398 XEX02893.1 mRNA capping enzyme large subunit [Monkeypox virus] diamond 11901 162 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
31871852 31871852 PRJNA1126198_P_NODE_216137_length_287_cov_2.327103_g215416_i0 PRJNA1126198 216137 287 2.327103 6.67878561 Monkeypox virus 10244 Viruses Viruses 189 1e-53   NR XEX53185.1 10244 g215416 i0 100 27.8048780487805 95 0 99.3 0 1 285 161 255 XEX53185.1 mRNA capping enzyme large subunit [Monkeypox virus] diamond 7980 189 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;