RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126198", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1126198 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24507403 24507403 PRJNA1126198_P_NODE_343060_length_256_cov_1.693989_g342339_i0 PRJNA1126198 343060 256 1.693989 4.33661184 Bacillati 1783272 Bacteria Bacteria 85.5 2.69e-17   NR HEV7679171.1 2052315 g342339 i0 48.8 9.69140625 82 42 96.1 0 254 9 231 312 HEV7679171.1 CaiB/BaiF CoA-transferase family protein [Candidatus Dormiibacterota bacterium] diamond 2481 85.5 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28764683 28764683 PRJNA1126198_P_NODE_368727_length_252_cov_0.871508_g368006_i0 PRJNA1126198 368727 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 74.3 2.92e-13   NR HYM75268.1 2052315 g368006 i0 55.7 2.67857142857143 61 27 72.6 0 67 249 4 64 HYM75268.1 MFS transporter [Candidatus Dormiibacterota bacterium] diamond 675 74.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;