RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1126198", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA1126198 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14310466 14310466 PRJNA1126198_P_NODE_386732_length_250_cov_0.881356_g386011_i0 PRJNA1126198 386732 250 0.881356 2.20339 Methanobacterium sp. MB1 1379702 Archaea Archaea 457 4.1099999999999985e-124   NTclustered gi|557945513|emb|HG425166.1| 1379702 g386011 i0 99.6 4.784 250 1 100 0 1 250 1458534 1458285 Methanobacterium sp. MB1 complete sequence blastn 1196 457 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. MB1
27038647 27038647 PRJNA1126198_P_NODE_461762_length_243_cov_0.882353_g461041_i0 PRJNA1126198 461762 243 0.882353 2.14411779 Methanobrevibacter sp. 66852 Archaea Archaea 73.6 4.84e-13   NR MBO7735568.1 66852 g461041 i0 47.8 0.827160493827161 67 35 82.7 0 43 243 1 67 MBO7735568.1 phage tail family protein [Methanobrevibacter sp.] diamond 201 73.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;