RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA1126198" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 28 ✖

bioproject 1

  • PRJNA1126198 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
281836 281836 PRJNA1126198_P_NODE_489901_length_228_cov_2.993548_g489180_i0 PRJNA1126198 489901 228 2.993548 6.82528944 Bodo saltans 75058 Euglenozoa other_Eukaryota 159 2.43e-46   NR CUG01306.1 75058 g489180 i0 97.3 0.960526315789474 73 2 96.1 0 221 3 181 253 CUG01306.1 WD40 repeat-containing protein, putative [Bodo saltans] diamond 219 159 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
2305941 2305941 PRJNA1126198_P_NODE_97742_length_344_cov_1.726937_g97024_i0 PRJNA1126198 97742 344 1.726937 5.94066328 Acrasis kona 1008807 Heterolobosea other_Eukaryota 128 7.05e-33   NR KAL0489302.1 1008807 g97024 i0 55.2 3.02616279069767 116 49 98.5 1 343 5 69 184 KAL0489302.1 quercetin 2,3-dioxygenase [Acrasis kona] diamond 1041 128 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
2831952 2831952 PRJNA1126198_P_NODE_240563_length_280_cov_4.028986_g239842_i0 PRJNA1126198 240563 280 4.028986 11.2811608 Bodo saltans 75058 Euglenozoa other_Eukaryota 147 2.7e-43   NR CUG87252.1 75058 g239842 i0 92.3 0.975 91 7 97.5 0 6 278 1 91 CUG87252.1 histone H3, putative [Bodo saltans] diamond 273 147 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
5384559 5384559 PRJNA1126198_P_NODE_302905_length_265_cov_1.385417_g302184_i0 PRJNA1126198 302905 265 1.385417 3.67135505 Bodo saltans 75058 Euglenozoa other_Eukaryota 151 2.23e-45   NR CUG81215.1 75058 g302184 i0 91.1 2.66037735849057 79 7 89.4 0 28 264 1 79 CUG81215.1 60S ribosomal protein L44, putative [Bodo saltans] diamond 705 151 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
7934723 7934723 PRJNA1126198_P_NODE_450027_length_244_cov_0.900585_g449306_i0 PRJNA1126198 450027 244 0.900585 2.1974274 Bodo saltans 75058 Euglenozoa other_Eukaryota 124 1.9e-34   NR CUG93082.1 75058 g449306 i0 78.9 0.872950819672131 71 15 87.3 0 31 243 1 71 CUG93082.1 Hypothetical protein, putative [Bodo saltans] diamond 213 124 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
10484883 10484883 PRJNA1126198_P_NODE_294149_length_267_cov_1.458763_g293428_i0 PRJNA1126198 294149 267 1.458763 3.89489721 Bodo saltans 75058 Euglenozoa other_Eukaryota 377 3.55e-100   NTclustered gi|206598189|gb|FJ168553.1| 75058 g293428 i0 92.135 3.93632958801498 267 21 100 0 1 267 15815 15549 Bodo saltans clone fosmid 46A11, complete sequence blastn 1051 377 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
10485291 10485291 PRJNA1126198_P_NODE_469409_length_242_cov_0.923077_g468688_i0 PRJNA1126198 469409 242 0.923077 2.23384634 Seculamonas ecuadoriensis 221724 Root_unresolved Root_unresolved 124 5.51e-31   NR WCZ58649.1 221724 g468688 i0 71.3 0.991735537190083 80 23 99.2 0 240 1 165 244 WCZ58649.1 T-complex protein 1 subunit eta [Seculamonas ecuadoriensis] diamond 240 124 1 Eukaryota Discoba       Jakobida   Seculamonas Seculamonas ecuadoriensis
15584792 15584792 PRJNA1126198_P_NODE_72393_length_367_cov_2.057823_g71676_i0 PRJNA1126198 72393 367 2.057823 7.55221041 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 176 2.15e-53   NR GET91638.1 5689 g71676 i0 66.1 27.41689373297 121 41 98.9 0 365 3 43 163 GET91638.1 nucleoside diphosphate kinase b [Leishmania tarentolae] diamond 10062 177 0.994350282485876 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae
20682947 20682947 PRJNA1126198_P_NODE_353857_length_254_cov_1.475138_g353136_i0 PRJNA1126198 353857 254 1.475138 3.74685052 Trachelomonas volvocina 103340 Euglenozoa other_Eukaryota 327 3.42e-85   NTclustered gi|5833112|gb|AF096995.1|AF096995 103340 g353136 i0 92.174 84.3425196850394 230 18 91 0 3 232 1354 1125 Trachelomonas volvocina 18S ribosomal RNA gene, complete sequence blastn 21423 327 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas volvocina
21958451 21958451 PRJNA1126198_P_NODE_416838_length_247_cov_0.896552_g416117_i0 PRJNA1126198 416838 247 0.896552 2.21448344 Leishmania martiniquensis 1580590 Euglenozoa other_Eukaryota 150 7.7e-32   NTclustered gi|2787672546|ref|XM_067325058.1| 1580590 g416117 i0 82.738 5.75708502024291 168 29 68 0 3 170 1380 1213 Leishmania martiniquensis uncharacterized protein (LSCM1_07696), partial mRNA blastn 1422 150 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis
26912003 26912003 PRJNA1126198_P_NODE_324042_length_260_cov_1.668449_g323321_i0 PRJNA1126198 324042 260 1.668449 4.3379674 Bodo saltans 75058 Euglenozoa other_Eukaryota 144 1.99e-39   NR CUG93596.1 75058 g323321 i0 77.9 0.992307692307692 86 19 99.2 0 2 259 323 408 CUG93596.1 farnesyltransferase, putative [Bodo saltans] diamond 258 144 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
26912009 26912009 PRJNA1126198_P_NODE_422122_length_246_cov_1.791908_g421401_i0 PRJNA1126198 422122 246 1.791908 4.40809368 Bodo saltans 75058 Euglenozoa other_Eukaryota 96.7 4.08e-21   NR CUI14355.1 75058 g421401 i0 68.6 0.853658536585366 70 22 85.4 0 216 7 383 452 CUI14355.1 RNA-binding protein, putative [Bodo saltans] diamond 210 96.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27101800 27101800 PRJNA1126198_P_NODE_303062_length_265_cov_1.322917_g302341_i0 PRJNA1126198 303062 265 1.322917 3.50573005 Bodo saltans 75058 Euglenozoa other_Eukaryota 90.9 4.94e-20   NR CUG86784.1 75058 g302341 i0 53.9 1.81132075471698 89 39 99.6 2 265 2 48 135 CUG86784.1 Hypothetical protein, putative [Bodo saltans] diamond 480 90.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27923066 27923066 PRJNA1126198_P_NODE_288625_length_268_cov_1.774359_g287904_i0 PRJNA1126198 288625 268 1.774359 4.75528212 Bodo saltans 75058 Euglenozoa other_Eukaryota 97.8 9.94e-23   NR CUG67720.1 75058 g287904 i0 60.7 0.996268656716418 89 35 99.6 0 1 267 131 219 CUG67720.1 Hypothetical protein, putative [Bodo saltans] diamond 267 97.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27986263 27986263 PRJNA1126198_P_NODE_292385_length_267_cov_2.046392_g291664_i0 PRJNA1126198 292385 267 2.046392 5.46386664 Euglena gracilis 3039 Euglenozoa other_Eukaryota 119 1.85e-32   NR QLA09633.1 3039 g291664 i0 75.6 0.876404494382023 78 19 87.6 0 6 239 62 139 QLA09633.1 60S large subunit ribosomal protein eL32 [Euglena gracilis] diamond 234 119 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28049407 28049407 PRJNA1126198_P_NODE_439285_length_245_cov_0.901163_g438564_i0 PRJNA1126198 439285 245 0.901163 2.20784935 Bodo saltans 75058 Euglenozoa other_Eukaryota 113 4.6800000000000005e-27   NR CUF90291.1 75058 g438564 i0 64.2 0.991836734693878 81 29 99.2 0 2 244 798 878 CUF90291.1 GPI-anchored surface protein, putative [Bodo saltans] diamond 243 113 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28080881 28080881 PRJNA1126198_P_NODE_381345_length_250_cov_2.163842_g380624_i0 PRJNA1126198 381345 250 2.163842 5.409605 Bodo saltans 75058 Euglenozoa other_Eukaryota 90.1 7.62e-19   NR CUG91688.1 75058 g380624 i0 53.5 1.032 86 37 99.6 2 250 2 23 108 CUG91688.1 phosphofructokinase, putative [Bodo saltans] diamond 258 90.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29375504 29375504 PRJNA1126198_P_NODE_446829_length_244_cov_0.912281_g446108_i0 PRJNA1126198 446829 244 0.912281 2.22596564 Bodo saltans 75058 Euglenozoa other_Eukaryota 99.4 1.7699999999999998e-24   NR CUF65287.1 75058 g446108 i0 93.6 0.577868852459016 47 2 57.8 1 142 2 87 132 CUF65287.1 zinc finger protein, putative [Bodo saltans] diamond 141 99.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30481082 30481082 PRJNA1126198_P_NODE_419133_length_247_cov_0.885057_g418412_i0 PRJNA1126198 419133 247 0.885057 2.18609079 Bodo saltans 75058 Euglenozoa other_Eukaryota 156 2.06e-42   NR CUG36287.1 75058 g418412 i0 87.7 0.983805668016194 81 10 98.4 0 3 245 357 437 CUG36287.1 GTP-binding elongation factor family, EF-Tu/EF-1A subfamily, putative [Bodo saltans] diamond 243 156 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30765405 30765405 PRJNA1126198_P_NODE_492774_length_227_cov_2.025974_g492052_i0 PRJNA1126198 492774 227 2.025974 4.59896098 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 48.5 2.83e-4   NR XP_002679874.1 5762 g492052 i0 38.5 0.859030837004405 65 39 85.9 1 2 196 374 437 XP_002679874.1 serine/threonine protein kinase [Naegleria gruberi] diamond 195 48.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31018190 31018190 PRJNA1126198_P_NODE_310435_length_263_cov_1.642105_g309714_i0 PRJNA1126198 310435 263 1.642105 4.31873615 Acrasis kona 1008807 Heterolobosea other_Eukaryota 43.9 0.0149   NR KAL0490557.1 1008807 g309714 i0 32.4 0.775665399239544 68 40 77.6 1 216 13 85 146 KAL0490557.1 hypothetical protein AKO1_003036 [Acrasis kona] diamond 204 43.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31070635 31070635 PRJNA1126198_P_NODE_447935_length_244_cov_0.912281_g447214_i0 PRJNA1126198 447935 244 0.912281 2.22596564 Trypanosoma 5690 Euglenozoa other_Eukaryota 57.8 3.93e-8   NR XP_029230180.1 83891 g447214 i0 58.1 1.58606557377049 43 17 52.9 1 60 188 116 157 XP_029230180.1 cytochrome c oxidase VIII (COX VIII) [Trypanosoma conorhini] diamond 387 57.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
31239200 31239200 PRJNA1126198_P_NODE_325335_length_260_cov_1.449198_g324614_i0 PRJNA1126198 325335 260 1.449198 3.7679148 Bodo saltans 75058 Euglenozoa other_Eukaryota 54.7 2.77e-6   NR CUG88705.1 75058 g324614 i0 36 1.02692307692308 89 44 98.1 3 258 4 14 93 CUG88705.1 Hypothetical protein, putative [Bodo saltans] diamond 267 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31397612 31397612 PRJNA1126198_P_NODE_234796_length_282_cov_1.488038_g234075_i0 PRJNA1126198 234796 282 1.488038 4.19626716 Angomonas deanei 59799 Euglenozoa other_Eukaryota 63.2 3.78e-9   NR EPY39888.1 59799 g234075 i0 35.5 0.98936170212766 93 44 98.9 1 3 281 46 122 EPY39888.1 ferredoxin--NADP+ reductase [Angomonas deanei] diamond 279 63.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
31397626 31397626 PRJNA1126198_P_NODE_368996_length_252_cov_0.871508_g368275_i0 PRJNA1126198 368996 252 0.871508 2.19620016 Bodo saltans 75058 Euglenozoa other_Eukaryota 114 2.5200000000000003e-27   NR CUG93664.1 75058 g368275 i0 65.1 0.988095238095238 83 27 98.8 1 250 2 287 367 CUG93664.1 Hypothetical protein, putative [Bodo saltans] diamond 249 114 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32093376 32093376 PRJNA1126198_P_NODE_240878_length_280_cov_2.280193_g240157_i0 PRJNA1126198 240878 280 2.280193 6.3845404 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 153 5.829999999999998e-42   NR XP_002670363.1 5762 g240157 i0 73.1 1.99285714285714 93 25 99.6 0 2 280 343 435 XP_002670363.1 chaperonin complex component, TCP-1 beta subunit [Naegleria gruberi] diamond 558 153 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32568256 32568256 PRJNA1126198_P_NODE_224559_length_285_cov_1.452830_g223838_i0 PRJNA1126198 224559 285 1.45283 4.1405655 Bodo saltans 75058 Euglenozoa other_Eukaryota 143 3.22e-37   NR CUE62474.1 75058 g223838 i0 77.4 0.978947368421053 93 21 97.9 0 3 281 168 260 CUE62474.1 Hypothetical protein, putative [Bodo saltans] diamond 279 143 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32788303 32788303 PRJNA1126198_P_NODE_377100_length_251_cov_0.876404_g376379_i0 PRJNA1126198 377100 251 0.876404 2.19977404 Bodo saltans 75058 Euglenozoa other_Eukaryota 140 3.4499999999999995e-37   NR CUG93198.1 75058 g376379 i0 80.5 0.9800796812749 82 16 98 0 247 2 413 494 CUG93198.1 wax ester synthase-like Acyl-CoA acyltransferase domain-containing protein, putative [Bodo saltans] diamond 246 140 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;